RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 MTCP1P56278 107 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 MRPL28Q13084 256 aaKnown RBP8.6□□□□□ -1.03
CCDC9-203ENST00000596938 ALKBH1Q13686 389 aaKnown RBP8.6□□□□□ -1.03
CCDC9-203ENST00000596938 MIDNQ504T8 468 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 KLHL22Q53GT1 634 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 LPCAT4Q643R3 524 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 HCP5Q6MZN7 132 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 SLC25A26Q70HW3 274 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 LHFPL3Q86UP9 236 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 FAM185AQ8N0U4 392 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 SPSB1Q96BD6 273 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 C4orf36Q96KX1 117 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 HEXA-AS1Q9H8Q6 139 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 BEX1Q9HBH7 125 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 AMBNQ9NP70 447 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 ERVK13-1Q9NX77 482 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 OR14J1Q9UGF5 321 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 MYRFQ9Y2G1 1151 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 MEIOCA2RUB1 952 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 GPR137BO60478 399 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 ZNF737O75373 536 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 ALX3O95076 343 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 CYB5AP00167 134 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 ZNF20P17024 532 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 OMGP23515 440 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 SAA4P35542 130 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 CEBPDP49716 269 aaPredicted RBP8.59□□□□□ -1.03
CCDC9-203ENST00000596938 RAG2P55895 527 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 DLX1P56177 255 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 RELBQ01201 579 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 COL10A1Q03692 680 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 PRB3Q04118 309 aaPredicted RBP8.59□□□□□ -1.03
CCDC9-203ENST00000596938 PDZK1IP1Q13113 114 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 KLRD1Q13241 179 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 TAF9Q16594 264 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 ZSCAN26Q16670 478 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 GDPGP1Q6ZNW5 385 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 LHFPL2Q6ZUX7 228 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 ZNF676Q8N7Q3 588 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 OR4M1Q8NGD0 313 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 OR52I1Q8NGK6 324 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 HAVCR2Q8TDQ0 301 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 APH1BQ8WW43 257 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 TAF15Q92804 592 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC9-203ENST00000596938 STMN2Q93045 179 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 SLAMF9Q96A28 289 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 SNX22Q96L94 193 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 ALG8Q9BVK2 526 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 JAM3Q9BX67 310 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 MEGF9Q9H1U4 602 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 ZNF696Q9H7X3 374 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 ISG20L2Q9H9L3 353 aaKnown RBP8.59□□□□□ -1.03
CCDC9-203ENST00000596938 SMPD3Q9NY59 655 aaPredicted RBP8.59□□□□□ -1.03
CCDC9-203ENST00000596938 ZNRD1Q9P1U0 126 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 TRRAPQ9Y4A5 3859 aa8.59□□□□□ -1.03
CCDC9-203ENST00000596938 TRBV2A0A0J9YWF9 115 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 A0A1W2PRD5 423 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 A0A1W2PRF3 423 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 A0A1W2PRM7 423 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 CLPSL1A2RUU4 121 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 C17orf98A8MV24 154 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 WBP4O75554 376 aaKnown RBP8.58□□□□□ -1.04
CCDC9-203ENST00000596938 ZFPL1O95159 310 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 PAHP00439 452 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 AZGP1P25311 298 aaKnown RBP8.58□□□□□ -1.04
CCDC9-203ENST00000596938 GBX2P52951 348 aaPredicted RBP8.58□□□□□ -1.04
CCDC9-203ENST00000596938 MEF2CQ06413 473 aaPredicted RBP8.58□□□□□ -1.04
CCDC9-203ENST00000596938 ZNF146Q15072 292 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 AANATQ16613 207 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 PRR31Q5SQ13 230 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 SERPINA12Q8IW75 414 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 FAM58AQ8N1B3 248 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 BATF2Q8N1L9 274 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 PNKDQ8N490 385 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 PARP16Q8N5Y8 322 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 ZSCAN4Q8NAM6 433 aaPredicted RBP8.58□□□□□ -1.04
CCDC9-203ENST00000596938 BEND2Q8NDZ0 799 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 ZNF555Q8NEP9 628 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 OR51A4Q8NGJ6 313 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 OR5D14Q8NGL3 314 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 OR13C3Q8NGS6 347 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 OR10AC1Q8NH08 325 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 OR5R1Q8NH85 324 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 AJUBAQ96IF1 538 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 OPALINQ96PE5 141 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 ZCCHC4Q9H5U6 513 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 RHOFQ9HBH0 211 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 NEK6Q9HC98 313 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 FGF20Q9NP95 211 aaPredicted RBP8.58□□□□□ -1.04
CCDC9-203ENST00000596938 C8orf4Q9NR00 106 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 VPREB3Q9UKI3 123 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 PKD1L1Q8TDX9 2849 aa8.58□□□□□ -1.04
CCDC9-203ENST00000596938 TMEM82A0PJX8 343 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 BTBD17A6NE02 478 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 TMEM212A6NML5 194 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 E9PI62 339 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 SPRY1O43609 319 aaPredicted RBP8.57□□□□□ -1.04
CCDC9-203ENST00000596938 ANGPTL7O43827 346 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 HAND1O96004 215 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 RBP4P02753 201 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms