RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PDZK1IP1Q13113 114 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 MED21Q13503 144 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 BRD3OSQ6XYD6 125 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 RNF144BQ7Z419 303 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 Q8N7P7 452 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.35■□□□□ 0.37
PNKP-209ENST00000596726 OR13C9Q8NGT0 318 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 GATAD2BQ8WXI9 593 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 SEBOXQ9HB31 216 aaPredicted RBP17.35■□□□□ 0.37
PNKP-209ENST00000596726 ELL3Q9HB65 397 aaPredicted RBP17.35■□□□□ 0.37
PNKP-209ENST00000596726 FKBP14Q9NWM8 211 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 CHCHD3Q9NX63 227 aaKnown RBP17.35■□□□□ 0.37
PNKP-209ENST00000596726 ONECUT1Q9UBC0 465 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 OR14J1Q9UGF5 321 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 DHDHQ9UQ10 334 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 STAB1Q9NY15 2570 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 DSCAML1Q8TD84 2053 aa17.35■□□□□ 0.37
PNKP-209ENST00000596726 TRBV23-1A0A0A0MS06 115 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 TRIM77I1YAP6 450 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 SLC1A7O00341 560 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 ZNF529Q6P280 563 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 RBMS3Q6XE24 437 aaKnown RBP17.34■□□□□ 0.37
PNKP-209ENST00000596726 C1orf122Q6ZSJ8 110 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 VMO1Q7Z5L0 202 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 Q8IYB0 196 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 BPIFB6Q8NFQ5 453 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 OR5D14Q8NGL3 314 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 FAM216AQ8WUB2 273 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 C1orf147Q96MC9 270 aaPredicted RBP17.34■□□□□ 0.37
PNKP-209ENST00000596726 PRDM13Q9H4Q3 707 aa17.34■□□□□ 0.37
PNKP-209ENST00000596726 INMTO95050 263 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 BCL3P20749 454 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 NPBWR2P48146 333 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 POU3F4P49335 361 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 RUSC1-AS1Q66K80 236 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 DMKNQ6E0U4 476 aaPredicted RBP17.33■□□□□ 0.36
PNKP-209ENST00000596726 ASPHD2Q6ICH7 369 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 METAP1DQ6UB28 335 aaPredicted RBP17.33■□□□□ 0.36
PNKP-209ENST00000596726 AHSA2Q719I0 299 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 CMTM4Q8IZR5 234 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 GPR148Q8TDV2 347 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 TSEN15Q8WW01 171 aaKnown RBP17.33■□□□□ 0.36
PNKP-209ENST00000596726 LHX4Q969G2 390 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 RFT1Q96AA3 541 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 SMIM19Q96E16 107 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 SPACA5Q96QH8 159 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 FAM234AQ9H0X4 552 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 NEK6Q9HC98 313 aa17.33■□□□□ 0.36
PNKP-209ENST00000596726 IGHV1-69DA0A0B4J2H0 117 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 IGKV1-12A0A0C4DH73 117 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 K7N7A8 449 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 M0R1W7 72 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 SPRY1O43609 319 aaPredicted RBP17.32■□□□□ 0.36
PNKP-209ENST00000596726 SULT1B1O43704 296 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 ZNF737O75373 536 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 CYB5AP00167 134 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 IGKV1D-12P01611 117 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 IGHV1-69P01742 117 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 TK1P04183 234 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 CHRM2P08172 466 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 OCM2P0CE71 109 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 OCMP0CE72 109 aaPredicted RBP17.32■□□□□ 0.36
PNKP-209ENST00000596726 C21orf33P30042 268 aaPredicted RBP17.32■□□□□ 0.36
PNKP-209ENST00000596726 CAPZA1P52907 286 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 UBA52P62987 128 aaKnown RBP17.32■□□□□ 0.36
PNKP-209ENST00000596726 COL10A1Q03692 680 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 C6orf141Q5SZD1 244 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 STX19Q8N4C7 294 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 EMG1Q92979 244 aaKnown RBP17.32■□□□□ 0.36
PNKP-209ENST00000596726 UNKLQ9H9P5 680 aaKnown RBP17.32■□□□□ 0.36
PNKP-209ENST00000596726 C19orf12Q9NSK7 152 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 RBFOX1Q9NWB1 397 aaKnown RBP17.32■□□□□ 0.36
PNKP-209ENST00000596726 ZNF281Q9Y2X9 895 aa17.32■□□□□ 0.36
PNKP-209ENST00000596726 A0A1W2PQ09 198 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 DNAJC9-AS1A6NH13 148 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 KDM4BO94953 1096 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 SOX2P48431 317 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 DEFB112Q30KQ8 113 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 SAXO1Q8IYX7 474 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 FAM58AQ8N1B3 248 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 GHSRQ92847 366 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 TNFRSF14Q92956 283 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 IL36RNQ9UBH0 155 aa17.31■□□□□ 0.36
PNKP-209ENST00000596726 MDFIC2A0A1B0GVS7 189 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 ANGPTL7O43827 346 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 HCKP08631 526 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 PRTN3P24158 256 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 ZP1P60852 638 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 BAMBIQ13145 260 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 ZNF146Q15072 292 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 KISS1Q15726 138 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 RNLSQ5VYX0 342 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 NANOGP1Q8N7R0 232 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 ZSCAN4Q8NAM6 433 aaPredicted RBP17.3■□□□□ 0.36
PNKP-209ENST00000596726 PGLYRP3Q96LB9 341 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 ZMAT3Q9HA38 289 aaKnown RBP17.3■□□□□ 0.36
PNKP-209ENST00000596726 HMG20AQ9NP66 347 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 SIRT7Q9NRC8 400 aa17.3■□□□□ 0.36
PNKP-209ENST00000596726 TRBV5-5A0A0J9YX44 114 aa17.29■□□□□ 0.36
PNKP-209ENST00000596726 CLDN34H7C241 214 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms