RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 TMEM185AQ8NFB2 350 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 OR4M1Q8NGD0 313 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 TRMT10AQ8TBZ6 339 aaKnown RBP8.53□□□□□ -1.04
LIG1-213ENST00000596672 NPRL2Q8WTW4 380 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 MED30Q96HR3 178 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 DMRTB1Q96MA1 342 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 ZNF649Q9BS31 505 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 MRPS26Q9BYN8 205 aaKnown RBP8.53□□□□□ -1.04
LIG1-213ENST00000596672 ABCB9Q9NP78 766 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 SCN3BQ9NY72 215 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 ENPP5Q9UJA9 477 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 GTF2A1LQ9UNN4 478 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 TMEM14AQ9Y6G1 99 aa8.53□□□□□ -1.04
LIG1-213ENST00000596672 A0A087WXM4 84 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 TMEM82A0PJX8 343 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 SLC22A31A6NKX4 558 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 ZNF670-ZNF695F2Z2N8 137 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 GPR37O15354 613 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 MPZL2O60487 215 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 ENTPD6O75354 484 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 ZNF737O75373 536 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 UBE2E1P51965 193 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 SNRPGP62308 76 aaKnown RBP8.52□□□□□ -1.05
LIG1-213ENST00000596672 EGR3Q06889 387 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 TP53I3Q53FA7 332 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 BCL2L15Q5TBC7 163 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 TREML4Q6UXN2 200 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 COMMD2Q86X83 199 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 FTMTQ8N4E7 242 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 TRUB1Q8WWH5 349 aaKnown RBP8.52□□□□□ -1.05
LIG1-213ENST00000596672 DYRK2Q92630 601 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 ADAT3Q96EY9 351 aaPredicted RBP8.52□□□□□ -1.05
LIG1-213ENST00000596672 HIST1H2AAQ96QV6 131 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 AMBNQ9NP70 447 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 PAK1IP1Q9NWT1 392 aaPredicted RBP8.52□□□□□ -1.05
LIG1-213ENST00000596672 WARS2Q9UGM6 360 aaKnown RBP8.52□□□□□ -1.05
LIG1-213ENST00000596672 TPRKBQ9Y3C4 175 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 SNX5Q9Y5X3 404 aa8.52□□□□□ -1.05
LIG1-213ENST00000596672 PLXNB1O43157 2135 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 MEIOCA2RUB1 952 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 NKX6-3A6NJ46 265 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 METTL15A6NJ78 407 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 M0R1W7 72 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 CHST1O43916 411 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 CLPXO76031 633 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 INMTO95050 263 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 KNG1P01042 644 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 TFAP2AP05549 437 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 CCDC159P0C7I6 412 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 CALCBP10092 127 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 NPBWR2P48146 333 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 BMXP51813 675 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 UTF1Q5T230 341 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 ZNF773Q6PK81 442 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 LHFPL4Q7Z7J7 247 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 FAM185AQ8N0U4 392 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 YIPF7Q8N8F6 280 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 OR10H4Q8NGA5 316 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 OR52N4Q8NGI2 321 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 OR8J1Q8NGP2 316 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 OR4F5Q8NH21 305 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 ZNF671Q8TAW3 534 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 GGHQ92820 318 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 Q96MT0 163 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 TEX12Q9BXU0 123 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 CCDC90BQ9GZT6 254 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 C16orf95Q9H693 158 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 BEX1Q9HBH7 125 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 RASL12Q9NYN1 266 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 BLOC1S6Q9UL45 172 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 RNF114Q9Y508 228 aa8.51□□□□□ -1.05
LIG1-213ENST00000596672 IGKV1-12A0A0C4DH73 117 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 LOC107986453A0A1B0GWG9 222 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 FAM230AA0A1W2PPH8 454 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 A0A1W2PQ09 198 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 ANKRD61A6NGH8 418 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 E9PI62 339 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 TSPAN9O75954 239 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 TSPAN15O95858 294 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 IGKV1D-12P01611 117 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 IGHA1P01876 353 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 TK1P04183 234 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 HTR1AP08908 422 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 OR2T7P0C7T2 308 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 PIPP12273 146 aaPredicted RBP8.5□□□□□ -1.05
LIG1-213ENST00000596672 RPL5P46777 297 aaKnown RBP8.5□□□□□ -1.05
LIG1-213ENST00000596672 OR12D2P58182 307 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 GABARAPL2P60520 117 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 COL10A1Q03692 680 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 OCLNQ16625 522 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 FBLN7Q53RD9 439 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 SLC35E4Q6ICL7 350 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 CCBE1Q6UXH8 406 aaPredicted RBP8.5□□□□□ -1.05
LIG1-213ENST00000596672 BAIAP2L2Q6UXY1 529 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 ZNF782Q6ZMW2 699 aaPredicted RBP8.5□□□□□ -1.05
LIG1-213ENST00000596672 C17orf107Q6ZR85 190 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 AHSA2Q719I0 299 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 GID4Q8IVV7 300 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 BEND2Q8NDZ0 799 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 OR51A4Q8NGJ6 313 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms