RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 DCXRQ7Z4W1 244 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 PEG10Q86TG7 708 aaKnown RBP13.48□□□□□ -0.25
PNKP-204ENST00000594661 ZNF664Q8N3J9 261 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 ADPRHL1Q8NDY3 354 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 SLC26A10Q8NG04 563 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 OR52N5Q8NH56 324 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 PPP1R14AQ96A00 147 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 PACRGQ96M98 296 aaPredicted RBP13.48□□□□□ -0.25
PNKP-204ENST00000594661 TMEM208Q9BTX3 173 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 SNHG12Q9BXW3 62 aa13.48□□□□□ -0.25
PNKP-204ENST00000594661 ZNF107Q9UII5 783 aaPredicted RBP13.48□□□□□ -0.25
PNKP-204ENST00000594661 TRAV18A0A075B6X5 111 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 PRR33A8MZF0 331 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 UMAD1C9J7I0 102 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 H0YIZ8 118 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 DVL1O14640 695 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 PHOX2AO14813 284 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 P04436 131 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 FABP4P15090 132 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 CFPP27918 469 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 SNCAP37840 140 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 CX3CR1P49238 355 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 NKX6-1P78426 367 aaPredicted RBP13.47□□□□□ -0.25
PNKP-204ENST00000594661 MRPS11P82912 194 aaKnown RBP13.47□□□□□ -0.25
PNKP-204ENST00000594661 CYCSP99999 105 aaKnown RBP13.47□□□□□ -0.25
PNKP-204ENST00000594661 PPP1R1AQ13522 171 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 SLC10A1Q14973 349 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 HSD17B11Q8NBQ5 300 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 MCHR2Q969V1 340 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 SLC5A7Q9GZV3 580 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 ASCL3Q9NQ33 180 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 VSIG4Q9Y279 399 aa13.47□□□□□ -0.25
PNKP-204ENST00000594661 EP300Q09472 2414 aaPredicted RBP13.47□□□□□ -0.25
PNKP-204ENST00000594661 SPAARA0A1B0GVQ0 90 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 MSGN1A6NI15 193 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 EEF1E1-BLOC1S5C9J1V9 151 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 TRAF3IP2O43734 574 aaPredicted RBP13.46□□□□□ -0.25
PNKP-204ENST00000594661 CBR3O75828 277 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 DCAF10Q5QP82 559 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 FAHD2BQ6P2I3 314 aaPredicted RBP13.46□□□□□ -0.25
PNKP-204ENST00000594661 Q6ZRG5 221 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 TMPPEQ6ZT21 453 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 LINC00346Q8IVM7 164 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 UEVLDQ8IX04 471 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 TERB2Q8NHR7 220 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 THRSPQ92748 146 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 FAHD2AQ96GK7 314 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 DMXL1Q9Y485 3027 aa13.46□□□□□ -0.25
PNKP-204ENST00000594661 TMEM269A0A1B0GVZ9 245 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 SMCO3A2RU48 225 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 METTL15P1P0C7V9 234 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.26
PNKP-204ENST00000594661 TDGF1P3P51864 188 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 ZNF674Q2M3X9 581 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.46□□□□□ -0.26
PNKP-204ENST00000594661 PRSS33Q8NF86 280 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 RNASEH2CQ8TDP1 164 aaKnown RBP13.46□□□□□ -0.26
PNKP-204ENST00000594661 ZNF385AQ96PM9 386 aaKnown RBP13.46□□□□□ -0.26
PNKP-204ENST00000594661 ACTR3CQ9C0K3 210 aaPredicted RBP13.46□□□□□ -0.26
PNKP-204ENST00000594661 CST11Q9H112 138 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 TAF9BQ9HBM6 251 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 CRLF2Q9HC73 371 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 DEPPQ9NTK1 212 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 SLC2A8Q9NY64 477 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 KLHL13Q9P2N7 655 aa13.46□□□□□ -0.26
PNKP-204ENST00000594661 CELSR3Q9NYQ7 3312 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 NCKAP5O14513 1909 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 LRRC3CA6NJW4 275 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 AQP7P3A6NL99 342 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 M0QYG6 137 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 TAAR5O14804 337 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 SYT7O43581 403 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 ID4P47928 161 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 CYB561P49447 251 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 EFNB2P52799 333 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 GUK1Q16774 197 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 MOGAT2Q3SYC2 334 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 TMEM268Q5VZI3 342 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 PRSS54Q6PEW0 395 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 CATSPERDQ86XM0 798 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 SEH1LQ96EE3 360 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 HIST1H2BLQ99880 126 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 MRPL13Q9BYD1 178 aaKnown RBP13.45□□□□□ -0.26
PNKP-204ENST00000594661 OR2S2Q9NQN1 319 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 SLC17A5Q9NRA2 495 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 PLA2G2EQ9NZK7 142 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 DNAJB11Q9UBS4 358 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 OR14J1Q9UGF5 321 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 DHDHQ9UQ10 334 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 IL18BPO95998 194 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 NPSP0C0P6 89 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 RFPL3SP0C7P2 107 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 GZMBP10144 247 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 ZNF17P17021 662 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 SLC35A1P78382 337 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 PDZD11Q5EBL8 140 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 TMEM225Q6GV28 225 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 ZNF529Q6P280 563 aa13.45□□□□□ -0.26
PNKP-204ENST00000594661 ZDHHC22Q8N966 263 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms