RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 MICBQ29980 383 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 RNLSQ5VYX0 342 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 HAGHLQ6PII5 290 aaPredicted RBP10.28□□□□□ -0.76
UPF1-203ENST00000594504 PNLDC1Q8NA58 520 aaKnown RBP10.28□□□□□ -0.76
UPF1-203ENST00000594504 ZNF671Q8TAW3 534 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 AQP3Q92482 292 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 C12orf43Q96C57 262 aaKnown RBP10.28□□□□□ -0.76
UPF1-203ENST00000594504 SMIM19Q96E16 107 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 CNBD2Q96M20 576 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 CITED1Q99966 193 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 CDCA4Q9BXL8 241 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 Q9H521 79 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 CNTD2Q9H8S5 307 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 ERGIC3Q9Y282 383 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 A0A1B0GUS0 222 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 FAM230AA0A1W2PPH8 454 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 A0A1W2PRD5 423 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 A0A1W2PRF3 423 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 A0A1W2PRM7 423 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.27□□□□□ -0.77
UPF1-203ENST00000594504 AKR7A2O43488 359 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 GPR137BO60478 399 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 RHBDL1O75783 438 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 NDUFA7O95182 113 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 LALBAP00709 142 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 TFF1P04155 84 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 PRKACBP22694 351 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 MPZP25189 248 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 IER3P46695 156 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 GMFBP60983 142 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 PDCD1Q15116 288 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 DMKNQ6E0U4 476 aaPredicted RBP10.27□□□□□ -0.77
UPF1-203ENST00000594504 BRICD5Q6PL45 260 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 VMO1Q7Z5L0 202 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 NANOGP1Q8N7R0 232 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 DNAAF1Q8NEP3 725 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 OR5T2Q8NGG2 359 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 LINC01006Q8NI28 216 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 TRMT10AQ8TBZ6 339 aaKnown RBP10.27□□□□□ -0.77
UPF1-203ENST00000594504 TBC1D15Q8TC07 691 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 GPR148Q8TDV2 347 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 NPRL2Q8WTW4 380 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 TSEN15Q8WW01 171 aaKnown RBP10.27□□□□□ -0.77
UPF1-203ENST00000594504 SPSB1Q96BD6 273 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 BORCS8Q96FH0 119 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 MND1Q9BWT6 205 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 PKIBQ9C010 78 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 DUSP21Q9H596 190 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 PAK1IP1Q9NWT1 392 aaPredicted RBP10.27□□□□□ -0.77
UPF1-203ENST00000594504 DHDHQ9UQ10 334 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 POLDIP2Q9Y2S7 368 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 RNF114Q9Y508 228 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 PCDHGB5Q9Y5G0 923 aa10.27□□□□□ -0.77
UPF1-203ENST00000594504 SIRT4Q9Y6E7 314 aaPredicted RBP10.27□□□□□ -0.77
UPF1-203ENST00000594504 IGKV1-9A0A0C4DH69 117 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 MT-ND2P03891 347 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 ATF1P18846 271 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 AMY2BP19961 511 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 GLRA1P23415 457 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 CRHBPP24387 322 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 BDH1Q02338 343 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 IL24Q13007 206 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 RBM48Q5RL73 367 aaKnown RBP10.26□□□□□ -0.77
UPF1-203ENST00000594504 ASPHD2Q6ICH7 369 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 SERPINA12Q8IW75 414 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 PARP16Q8N5Y8 322 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 TMEM86BQ8N661 226 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 FAM216BQ8N7L0 139 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 POC1AQ8NBT0 407 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 OR5D14Q8NGL3 314 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 SSMEM1Q8WWF3 244 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 RGP1Q92546 391 aaPredicted RBP10.26□□□□□ -0.77
UPF1-203ENST00000594504 DYRK2Q92630 601 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 WDR13Q9H1Z4 485 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 NEK6Q9HC98 313 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 SIRT7Q9NRC8 400 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 RASL12Q9NYN1 266 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 KAAG1Q9UBP8 84 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 RPUSD1Q9UJJ7 312 aaKnown RBP10.26□□□□□ -0.77
UPF1-203ENST00000594504 BLOC1S6Q9UL45 172 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 ZNF281Q9Y2X9 895 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 POMT1Q9Y6A1 747 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 TRRAPQ9Y4A5 3859 aa10.26□□□□□ -0.77
UPF1-203ENST00000594504 IGKV1-27A0A075B6S5 117 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 DENRO43583 198 aaKnown RBP10.25□□□□□ -0.77
UPF1-203ENST00000594504 RGS10O43665 173 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 SYNGR1O43759 233 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 NOS1APO75052 506 aaPredicted RBP10.25□□□□□ -0.77
UPF1-203ENST00000594504 ALX3O95076 343 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 CD1AP06126 327 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 CD2P06729 351 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 ACAA1P09110 424 aaPredicted RBP10.25□□□□□ -0.77
UPF1-203ENST00000594504 OCM2P0CE71 109 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 OCMP0CE72 109 aaPredicted RBP10.25□□□□□ -0.77
UPF1-203ENST00000594504 PGA5P0DJD9 388 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 SELLP14151 372 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 AZGP1P25311 298 aaKnown RBP10.25□□□□□ -0.77
UPF1-203ENST00000594504 RBP2P50120 134 aa10.25□□□□□ -0.77
UPF1-203ENST00000594504 ATP1B3P54709 279 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms