RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 PLGRKTQ9HBL7 147 aa12.9□□□□□ -0.34
FOXA3-202ENST00000594297 ARHGAP32A7KAX9 2087 aa12.9□□□□□ -0.34
FOXA3-202ENST00000594297 IGHV1-69-2A0A0G2JMI3 117 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 TPD52L2O43399 206 aaKnown RBP12.89□□□□□ -0.35
FOXA3-202ENST00000594297 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
FOXA3-202ENST00000594297 MDKP21741 143 aaPredicted RBP12.89□□□□□ -0.35
FOXA3-202ENST00000594297 UBE2V2Q15819 145 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 DGUOKQ16854 277 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 FAM209AQ5JX71 171 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 HIST2H2BDQ6DRA6 164 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 ZNF529Q6P280 563 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 BCL6BQ8N143 479 aaPredicted RBP12.89□□□□□ -0.35
FOXA3-202ENST00000594297 NPRL2Q8WTW4 380 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 OR5P3Q8WZ94 311 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 ORAI1Q96D31 301 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 ELMOD3Q96FG2 381 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 GAL3ST1Q99999 423 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 UQCC2Q9BRT2 126 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 PPIL3Q9H2H8 161 aaKnown RBP12.89□□□□□ -0.35
FOXA3-202ENST00000594297 RNF167Q9H6Y7 350 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 MSL2Q9HCI7 577 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 ZNF69Q9UC07 566 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 AK6Q9Y3D8 172 aaKnown RBP12.89□□□□□ -0.35
FOXA3-202ENST00000594297 TANC2Q9HCD6 1990 aa12.89□□□□□ -0.35
FOXA3-202ENST00000594297 NOTCH1P46531 2555 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 POM121CA8CG34 1229 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 NOTOA8MTQ0 251 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 ZNF732B4DXR9 585 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 TNFRSF1AP19438 455 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 RPS19P39019 145 aaKnown RBP12.88□□□□□ -0.35
FOXA3-202ENST00000594297 MMP15P51511 669 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 BAMBIQ13145 260 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 KISS1Q15726 138 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 LRRTM1Q86UE6 522 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 CELF2-AS1Q8N7Q2 184 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 DEFB108BQ8NET1 73 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 OR6M1Q8NGM8 313 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 NDNFQ8TB73 568 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 TRMT10AQ8TBZ6 339 aaKnown RBP12.88□□□□□ -0.35
FOXA3-202ENST00000594297 DECR2Q9NUI1 292 aa12.88□□□□□ -0.35
FOXA3-202ENST00000594297 SPRY3O43610 288 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 GPM6AP51674 278 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 SRSF4Q08170 494 aaKnown RBP12.87□□□□□ -0.35
FOXA3-202ENST00000594297 SPCS2Q15005 226 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 RAB11BQ15907 218 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 KLF17Q5JT82 389 aaPredicted RBP12.87□□□□□ -0.35
FOXA3-202ENST00000594297 MZT2AQ6P582 158 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 MKXQ8IYA7 352 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 OR52N4Q8NGI2 321 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 OR51A2Q8NGJ7 313 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 SLC25A46Q96AG3 418 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 ITPKCQ96DU7 683 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 IL19Q9UHD0 177 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 NUP50Q9UKX7 468 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 POLDIP2Q9Y2S7 368 aa12.87□□□□□ -0.35
FOXA3-202ENST00000594297 IGKV1-9A0A0C4DH69 117 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 A0A1B0GWJ7 208 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 ADH4P08319 380 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 UBBP0CG47 229 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 TMEM225BP0DP42 221 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 ZNF182P17025 639 aaPredicted RBP12.86□□□□□ -0.35
FOXA3-202ENST00000594297 HTR2CP28335 458 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 TNFAIP6P98066 277 aaPredicted RBP12.86□□□□□ -0.35
FOXA3-202ENST00000594297 HNRNPA0Q13151 305 aaKnown RBP12.86□□□□□ -0.35
FOXA3-202ENST00000594297 GPR176Q14439 515 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 OR10AD1Q8NGE0 317 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 ZNF671Q8TAW3 534 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 ACOT12Q8WYK0 555 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 ERGIC1Q969X5 290 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 SLC25A28Q96A46 364 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 KCTD12Q96CX2 325 aaKnown RBP12.86□□□□□ -0.35
FOXA3-202ENST00000594297 TIMD4Q96H15 378 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 SAP30LQ9HAJ7 183 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 CCDC59Q9P031 241 aaKnown RBP12.86□□□□□ -0.35
FOXA3-202ENST00000594297 GHRLQ9UBU3 117 aa12.86□□□□□ -0.35
FOXA3-202ENST00000594297 PQLC2LA1A4F0 135 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 ISPDA4D126 451 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 ZSCAN5BA6NJL1 495 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 A6NLC8 198 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 IFITM5A6NNB3 132 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 F5H5P2 479 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 AIPO00170 330 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 SLC17A2O00624 439 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
FOXA3-202ENST00000594297 GRPP07492 148 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 IRF2P14316 349 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 OMGP23515 440 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 TGFBR1P36897 503 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 CD200P41217 278 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 HAAOP46952 286 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 SLC9A3R2Q15599 337 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 HFEQ30201 348 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 C1orf100Q5SVJ3 147 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 IDNKQ5T6J7 187 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 ASPHD2Q6ICH7 369 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 SFXN4Q6P4A7 337 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 Q6ZR03 302 aa12.85□□□□□ -0.35
FOXA3-202ENST00000594297 ZSCAN4Q8NAM6 433 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms