RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 ASPHD2Q6ICH7 369 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 ZNF529Q6P280 563 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 MKXQ8IYA7 352 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 Q8IYB0 196 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 ZNF561Q8N587 486 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 TMEM185AQ8NFB2 350 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 H1FXQ92522 213 aaKnown RBP12.03□□□□□ -0.48
VRK3-206ENST00000594090 EMG1Q92979 244 aaKnown RBP12.03□□□□□ -0.48
VRK3-206ENST00000594090 DCTN5Q9BTE1 182 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 CDCA4Q9BXL8 241 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 ELL3Q9HB65 397 aaPredicted RBP12.03□□□□□ -0.48
VRK3-206ENST00000594090 TAS2R4Q9NYW5 299 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 OR14J1Q9UGF5 321 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 NUP50Q9UKX7 468 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 TPRKBQ9Y3C4 175 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 MMP9P14780 707 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 NDUFB7P17568 137 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 RAB3AP20336 220 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 BCL3P20749 454 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 NPBWR2P48146 333 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 RPS11P62280 158 aaKnown RBP eCLIP12.03□□□□□ -0.48
VRK3-206ENST00000594090 KISS1Q15726 138 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 LY6G5BQ8NDX9 201 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 OR51A2Q8NGJ7 313 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 OR5D18Q8NGL1 313 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 C8orf46Q8TAG6 207 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 SIRPDQ9H106 197 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 DUSP21Q9H596 190 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 RBFOX1Q9NWB1 397 aaKnown RBP12.03□□□□□ -0.48
VRK3-206ENST00000594090 PCDHGB5Q9Y5G0 923 aa12.03□□□□□ -0.48
VRK3-206ENST00000594090 TCF21O43680 179 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 ANGPTL7O43827 346 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 TOX4O94842 621 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 SFTPBP07988 381 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 IGHV4-38-2P0DP08 117 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 CELP19835 753 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 CRHBPP24387 322 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 CAPZA1P52907 286 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 ZP1P60852 638 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 BDH1Q02338 343 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 ACSM1Q08AH1 577 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 IRF3Q14653 427 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 Q499Y3 187 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 METTL11BQ5VVY1 283 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 CPNE2Q96FN4 548 aaPredicted RBP12.02□□□□□ -0.49
VRK3-206ENST00000594090 WDFY2Q96P53 400 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 TBX15Q96SF7 602 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 SLC6A7Q99884 636 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 PCGF1Q9BSM1 259 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 CNTD2Q9H8S5 307 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 IL36RNQ9UBH0 155 aa12.02□□□□□ -0.49
VRK3-206ENST00000594090 LSM2Q9Y333 95 aaKnown RBP12.02□□□□□ -0.49
VRK3-206ENST00000594090 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 IGHV3OR16-10A0A075B7F0 116 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 IGKV1-12A0A0C4DH73 117 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 RGS10O43665 173 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 KDM4BO94953 1096 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 IGKV1D-12P01611 117 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 CD1AP06126 327 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 ARF6P62330 175 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 PPP3R1P63098 170 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 SRSF2Q01130 221 aaKnown RBP12.01□□□□□ -0.49
VRK3-206ENST00000594090 SPHARQ15513 63 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 FIP1L1Q6UN15 594 aaKnown RBP12.01□□□□□ -0.49
VRK3-206ENST00000594090 SAXO1Q8IYX7 474 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 FAM58AQ8N1B3 248 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 BPIFB2Q8N4F0 458 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 KIR3DL3Q8N743 410 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 ZSCAN4Q8NAM6 433 aaPredicted RBP12.01□□□□□ -0.49
VRK3-206ENST00000594090 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 DMRTB1Q96MA1 342 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 OR5M11Q96RB7 305 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 ZNF184Q99676 751 aaPredicted RBP12.01□□□□□ -0.49
VRK3-206ENST00000594090 ONECUT1Q9UBC0 465 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 ZNF69Q9UC07 566 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 KPTNQ9Y664 436 aa12.01□□□□□ -0.49
VRK3-206ENST00000594090 TRBV23-1A0A0A0MS06 115 aa12□□□□□ -0.49
VRK3-206ENST00000594090 GABRPO00591 440 aa12□□□□□ -0.49
VRK3-206ENST00000594090 MAGEB3O15480 346 aa12□□□□□ -0.49
VRK3-206ENST00000594090 RGS9O75916 674 aaPredicted RBP12□□□□□ -0.49
VRK3-206ENST00000594090 TK1P04183 234 aa12□□□□□ -0.49
VRK3-206ENST00000594090 ALDOBP05062 364 aa12□□□□□ -0.49
VRK3-206ENST00000594090 CALCBP10092 127 aa12□□□□□ -0.49
VRK3-206ENST00000594090 PRKACAP17612 351 aa12□□□□□ -0.49
VRK3-206ENST00000594090 IGFBP3P17936 291 aaPredicted RBP12□□□□□ -0.49
VRK3-206ENST00000594090 FPR2P25090 351 aa12□□□□□ -0.49
VRK3-206ENST00000594090 COL10A1Q03692 680 aa12□□□□□ -0.49
VRK3-206ENST00000594090 MED22Q15528 200 aa12□□□□□ -0.49
VRK3-206ENST00000594090 TUSC1Q2TAM9 212 aa12□□□□□ -0.49
VRK3-206ENST00000594090 RBM48Q5RL73 367 aaKnown RBP12□□□□□ -0.49
VRK3-206ENST00000594090 ASCC1Q8N9N2 400 aaKnown RBP12□□□□□ -0.49
VRK3-206ENST00000594090 OR52N4Q8NGI2 321 aa12□□□□□ -0.49
VRK3-206ENST00000594090 ZNF418Q8TF45 676 aaPredicted RBP12□□□□□ -0.49
VRK3-206ENST00000594090 ORAI1Q96D31 301 aa12□□□□□ -0.49
VRK3-206ENST00000594090 OR14A2Q96R54 314 aa12□□□□□ -0.49
VRK3-206ENST00000594090 SUCNR1Q9BXA5 334 aa12□□□□□ -0.49
VRK3-206ENST00000594090 FAM234AQ9H0X4 552 aa12□□□□□ -0.49
VRK3-206ENST00000594090 HMG20AQ9NP66 347 aa12□□□□□ -0.49
VRK3-206ENST00000594090 MXRA5Q9NR99 2828 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms