RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 LOC390937A0A1W2PQ73 354 aa16.65■□□□□ 0.26
LSM4-203ENST00000593829 TRIM77I1YAP6 450 aa16.65■□□□□ 0.26
LSM4-203ENST00000593829 PRSS12P56730 875 aa16.65■□□□□ 0.26
LSM4-203ENST00000593829 RPS11P62280 158 aaKnown RBP eCLIP16.65■□□□□ 0.26
LSM4-203ENST00000593829 Q6ZR03 302 aa16.65■□□□□ 0.26
LSM4-203ENST00000593829 KCTD20Q7Z5Y7 419 aa16.65■□□□□ 0.26
LSM4-203ENST00000593829 SPSB4Q96A44 273 aa16.65■□□□□ 0.26
LSM4-203ENST00000593829 MRPS7Q9Y2R9 242 aaKnown RBP16.65■□□□□ 0.26
LSM4-203ENST00000593829 HIVEP1P15822 2718 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 IGHV4-30-2A0A087WSY4 118 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 SNRPGP15A8MWD9 76 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 ZNF879B4DU55 563 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 H7C1Q1 480 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 NDUFS8O00217 210 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 PDCD5O14737 125 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 RAP2BP61225 183 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 MRPS11P82912 194 aaKnown RBP16.64■□□□□ 0.26
LSM4-203ENST00000593829 IQCF2Q8IXL9 164 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 CMTM4Q8IZR5 234 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 BHLHE23Q8NDY6 225 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 OR13G1Q8NGZ3 307 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 RDH5Q92781 318 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 SGK3Q96BR1 496 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 PELI1Q96FA3 418 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 MRPL48Q96GC5 212 aaKnown RBP16.64■□□□□ 0.26
LSM4-203ENST00000593829 ARPC5LQ9BPX5 153 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 REG4Q9BYZ8 158 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 EGLN1Q9GZT9 426 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 PIPOXQ9P0Z9 390 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 ZNF319Q9P2F9 582 aa16.64■□□□□ 0.26
LSM4-203ENST00000593829 TMEM269A0A1B0GVZ9 245 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 GGT3PA6NGU5 568 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 ACOD1A6NK06 481 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 OR2A4O95047 310 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 TSPAN5P62079 268 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 GLDNQ6ZMI3 551 aaPredicted RBP16.64■□□□□ 0.25
LSM4-203ENST00000593829 SSX6Q7RTT6 188 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 OR2Z1Q8NG97 314 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 OR13C5Q8NGS8 318 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 LGALS14Q8TCE9 139 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 C15orf40Q8WUR7 153 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 DACT3Q96B18 629 aaPredicted RBP16.64■□□□□ 0.25
LSM4-203ENST00000593829 REEP6Q96HR9 211 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 OR2A7Q96R45 310 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 AIFM2Q9BRQ8 373 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 RGCCQ9H4X1 137 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 AUNIPQ9H7T9 357 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 SAP30LQ9HAJ7 183 aa16.64■□□□□ 0.25
LSM4-203ENST00000593829 CD300LBA8K4G0 201 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 LYNX1G3V0Z9 82 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 CD55P08174 381 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 LYNX1P0DP58 116 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 FOSL1P15407 271 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 SLC25A16P16260 332 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 TNFSF4P23510 183 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 Q6ZTK2 550 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 ZNF671Q8TAW3 534 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 ELMOD3Q96FG2 381 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 PIMREGQ9BSJ6 248 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 TMEM100Q9NV29 134 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 FAM206AQ9NX38 181 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 RDH8Q9NYR8 311 aa16.63■□□□□ 0.25
LSM4-203ENST00000593829 MRM2Q9UI43 246 aaKnown RBP16.63■□□□□ 0.25
LSM4-203ENST00000593829 MFSD2BA6NFX1 497 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 RNF223E7ERA6 249 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 MAGEB4O15481 346 aaPredicted RBP16.62■□□□□ 0.25
LSM4-203ENST00000593829 GMDSO60547 372 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 LILRA1O75019 489 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 B3GALNT1O75752 331 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 COL8A2P25067 703 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 TNFAIP6P98066 277 aaPredicted RBP16.62■□□□□ 0.25
LSM4-203ENST00000593829 GFOD2Q3B7J2 385 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 RNASE12Q5GAN4 147 aaKnown RBP16.62■□□□□ 0.25
LSM4-203ENST00000593829 PXDC1Q5TGL8 231 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 FAM122CQ6P4D5 195 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 OVCH2Q7RTZ1 564 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 CIARTQ8N365 385 aaPredicted RBP16.62■□□□□ 0.25
LSM4-203ENST00000593829 C18orf12Q96KH6 178 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 GLS2Q9UI32 602 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 A0A0B4J203 849 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 ANKRD20A5PA0PJZ0 165 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 AIPO00170 330 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 ACHEP22303 614 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 MMP16P51512 607 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 OR8B12Q8NGG6 310 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 RAB40AQ8WXH6 277 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 CHODLQ9H9P2 273 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 GPN1Q9HCN4 374 aaPredicted RBP16.62■□□□□ 0.25
LSM4-203ENST00000593829 ZNF391Q9UJN7 358 aa16.62■□□□□ 0.25
LSM4-203ENST00000593829 FLNAP21333 2647 aaKnown RBP16.61■□□□□ 0.25
LSM4-203ENST00000593829 FAM3AP98173 230 aa16.61■□□□□ 0.25
LSM4-203ENST00000593829 ZNF684Q5T5D7 378 aa16.61■□□□□ 0.25
LSM4-203ENST00000593829 MGAT4CQ9UBM8 478 aa16.61■□□□□ 0.25
LSM4-203ENST00000593829 AK6Q9Y3D8 172 aaKnown RBP16.61■□□□□ 0.25
LSM4-203ENST00000593829 IGHV1-69-2A0A0G2JMI3 117 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 A0A1B0GWJ7 208 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 IFITM5A6NNB3 132 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 VWC2LB2RUY7 222 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 KRBOX1C9JBD0 128 aa16.6■□□□□ 0.25
LSM4-203ENST00000593829 SMAD7O15105 426 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms