RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ERVK11-1P61568 191 aa18.27■□□□□ 0.52
SSBP4-203ENST00000593641 SGCDQ92629 289 aa18.27■□□□□ 0.52
SSBP4-203ENST00000593641 NRBF2Q96F24 287 aa18.27■□□□□ 0.52
SSBP4-203ENST00000593641 CEP19Q96LK0 163 aa18.27■□□□□ 0.52
SSBP4-203ENST00000593641 ZNF714Q96N38 554 aa18.27■□□□□ 0.52
SSBP4-203ENST00000593641 CITED2Q99967 270 aaPredicted RBP18.27■□□□□ 0.52
SSBP4-203ENST00000593641 NECAP2Q9NVZ3 263 aa18.27■□□□□ 0.52
SSBP4-203ENST00000593641 MEX3AA1L020 520 aaKnown RBP18.26■□□□□ 0.51
SSBP4-203ENST00000593641 ALDOBP05062 364 aa18.26■□□□□ 0.51
SSBP4-203ENST00000593641 NXNL2Q5VZ03 156 aa18.26■□□□□ 0.51
SSBP4-203ENST00000593641 OR8H2Q8N162 312 aa18.26■□□□□ 0.51
SSBP4-203ENST00000593641 OR5M11Q96RB7 305 aa18.26■□□□□ 0.51
SSBP4-203ENST00000593641 ADGRL4Q9HBW9 690 aa18.26■□□□□ 0.51
SSBP4-203ENST00000593641 CLN6Q9NWW5 311 aa18.26■□□□□ 0.51
SSBP4-203ENST00000593641 DNAH3Q8TD57 4116 aa18.26■□□□□ 0.51
SSBP4-203ENST00000593641 KIAA2026Q5HYC2 2103 aa18.25■□□□□ 0.51
SSBP4-203ENST00000593641 H3BUI4 141 aa18.25■□□□□ 0.51
SSBP4-203ENST00000593641 ZNF737O75373 536 aa18.25■□□□□ 0.51
SSBP4-203ENST00000593641 RPP14O95059 124 aaKnown RBP18.25■□□□□ 0.51
SSBP4-203ENST00000593641 FAM107AO95990 144 aa18.25■□□□□ 0.51
SSBP4-203ENST00000593641 VDAC2P45880 294 aaPredicted RBP18.25■□□□□ 0.51
SSBP4-203ENST00000593641 DYNLT3P51808 116 aa18.25■□□□□ 0.51
SSBP4-203ENST00000593641 MEF2CQ06413 473 aaPredicted RBP18.25■□□□□ 0.51
SSBP4-203ENST00000593641 EDDM3AQ14507 147 aa18.25■□□□□ 0.51
SSBP4-203ENST00000593641 FAHD1Q6P587 224 aa18.25■□□□□ 0.51
SSBP4-203ENST00000593641 Q6ZSR3 168 aa18.25■□□□□ 0.51
SSBP4-203ENST00000593641 BCDIN3DQ7Z5W3 292 aaKnown RBP18.25■□□□□ 0.51
SSBP4-203ENST00000593641 MRM2Q9UI43 246 aaKnown RBP18.25■□□□□ 0.51
SSBP4-203ENST00000593641 hADV38S2A0JD32 116 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 M0R129 80 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 GATBO75879 557 aaKnown RBP18.24■□□□□ 0.51
SSBP4-203ENST00000593641 DNAJC8O75937 253 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-203ENST00000593641 KRT8P05787 483 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 CCL1P22362 96 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 DAPP51397 102 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 LOXL3P58215 753 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 ACTA2P62736 377 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 ACTG2P63267 376 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 ACTC1P68032 377 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 ACTA1P68133 377 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 SLC34A1Q06495 639 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 ODF4Q2M2E3 257 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 LDLRAD2Q5SZI1 272 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 TCEANCQ8N8B7 351 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 YIPF7Q8N8F6 280 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 WIPF2Q8TF74 440 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-203ENST00000593641 SLAMF9Q96A28 289 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 SNX22Q96L94 193 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 CADM1Q9BY67 442 aaKnown RBP18.24■□□□□ 0.51
SSBP4-203ENST00000593641 WNT10AQ9GZT5 417 aa18.24■□□□□ 0.51
SSBP4-203ENST00000593641 TCRBV3S1A0A5B6 114 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 SYT7O43581 403 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 DNAL1Q4LDG9 190 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 MINOS1Q5TGZ0 78 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 AADACL4Q5VUY2 407 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 GID4Q8IVV7 300 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 ZNF676Q8N7Q3 588 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 NDNFQ8TB73 568 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 TMEM163Q8TC26 289 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 PHF21AQ96BD5 680 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 KRT84Q9NSB2 600 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 MTCH1Q9NZJ7 389 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 HILPDAQ9Y5L2 63 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 SESN1Q9Y6P5 492 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 MINOS1-NBL1R4GNA1 71 aa18.23■□□□□ 0.51
SSBP4-203ENST00000593641 F8VVB4 439 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 F8VWA3 439 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 H3BSH0 61 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 GYG2O15488 501 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 INMTO95050 263 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 AZGP1P25311 298 aaKnown RBP18.22■□□□□ 0.51
SSBP4-203ENST00000593641 FUT6P51993 359 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 SLX4IPQ5VYV7 408 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 ZBTB49Q6ZSB9 765 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 TCF23Q7RTU1 214 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 EMG1Q92979 244 aaKnown RBP18.22■□□□□ 0.51
SSBP4-203ENST00000593641 BORCS8Q96FH0 119 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 TBX5Q99593 518 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 ADI1Q9BV57 179 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 AURKAIP1Q9NWT8 199 aaPredicted RBP18.22■□□□□ 0.51
SSBP4-203ENST00000593641 LINC00312Q9Y6C7 94 aa18.22■□□□□ 0.51
SSBP4-203ENST00000593641 IGHV2-26A0A0B4J1V2 119 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 ADARB2-AS1A8MUL3 147 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 HAND1O96004 215 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 SERPINA3P01011 423 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 GABRR1P24046 479 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 PEX2P28328 305 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 BLCAPP62952 87 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 UBE2V2Q15819 145 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 GRK1Q15835 563 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 TMEM95Q3KNT9 176 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 SLC25A26Q70HW3 274 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 EGFL6Q8IUX8 553 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 Q8IYB0 196 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 CCDC54Q8NEL0 328 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 CLEC7AQ9BXN2 247 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 CHST5Q9GZS9 411 aa18.21■□□□□ 0.51
SSBP4-203ENST00000593641 IGKV1-27A0A075B6S5 117 aa18.2■□□□□ 0.5
SSBP4-203ENST00000593641 TMEM82A0PJX8 343 aa18.2■□□□□ 0.5
SSBP4-203ENST00000593641 CD33P20138 364 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms