RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ARSJQ5FYB0 599 aaPredicted RBP13.13□□□□□ -0.31
LIG1-205ENST00000593425 GDPD3Q7L5L3 318 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 AQP12AQ8IXF9 295 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 ZNF714Q96N38 554 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 OCSTAMPQ9BR26 566 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 CADM1Q9BY67 442 aaKnown RBP13.13□□□□□ -0.31
LIG1-205ENST00000593425 ADGRL4Q9HBW9 690 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 MTCH1Q9NZJ7 389 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 MRM2Q9UI43 246 aaKnown RBP13.13□□□□□ -0.31
LIG1-205ENST00000593425 IGKV1-27A0A075B6S5 117 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 FAM230AA0A1W2PPH8 454 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 TMEM82A0PJX8 343 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 H3BSH0 61 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 F2RL2O00254 374 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 INMTO95050 263 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 CHRM2P08172 466 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 CD33P20138 364 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 ACTA2P62736 377 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 ACTG2P63267 376 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 ACTC1P68032 377 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 ACTA1P68133 377 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 CBX1P83916 185 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 SLC34A1Q06495 639 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 EDDM3AQ14507 147 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 SLC35F2Q8IXU6 374 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 OR8H2Q8N162 312 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 TPRX1Q8N7U7 411 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 SLAMF9Q96A28 289 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 CEP19Q96LK0 163 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 THTPAQ9BU02 230 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 PAPOLBQ9NRJ5 636 aaKnown RBP13.12□□□□□ -0.31
LIG1-205ENST00000593425 IL36RNQ9UBH0 155 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 DNAJB9Q9UBS3 223 aa13.12□□□□□ -0.31
LIG1-205ENST00000593425 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.12□□□□□ -0.31
LIG1-205ENST00000593425 IGHV2-26A0A0B4J1V2 119 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 DHRS7CA6NNS2 312 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 MPIG6BO95866 241 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 CCL1P22362 96 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 OR12D2P58182 307 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 CD83Q01151 205 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 PTGES3Q15185 160 aaKnown RBP13.11□□□□□ -0.31
LIG1-205ENST00000593425 UBE2V2Q15819 145 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 ODF4Q2M2E3 257 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 MEPCEQ7L2J0 689 aaKnown RBP13.11□□□□□ -0.31
LIG1-205ENST00000593425 SSX6Q7RTT6 188 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 ZNF676Q8N7Q3 588 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 WFDC9Q8NEX5 89 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 OR5AU1Q8NGC0 362 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 SNX5Q9Y5X3 404 aa13.11□□□□□ -0.31
LIG1-205ENST00000593425 KMT2CQ8NEZ4 4911 aaKnown RBP13.1□□□□□ -0.31
LIG1-205ENST00000593425 FAM90A22PA8MWA6 464 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 FKBP6O75344 327 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 RPP14O95059 124 aaKnown RBP13.1□□□□□ -0.31
LIG1-205ENST00000593425 IGHA1P01876 353 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 DAPP51397 102 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 MEF2CQ06413 473 aaPredicted RBP13.1□□□□□ -0.31
LIG1-205ENST00000593425 TCTEX1D4Q5JR98 221 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 MINOS1Q5TGZ0 78 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 AADACL4Q5VUY2 407 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 FAHD1Q6P587 224 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 OR52N4Q8NGI2 321 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 NDNFQ8TB73 568 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 SNX22Q96L94 193 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 CHST6Q9GZX3 395 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 PLEKHA1Q9HB21 404 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 SLC7A11Q9UPY5 501 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 SESN1Q9Y6P5 492 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 MINOS1-NBL1R4GNA1 71 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
LIG1-205ENST00000593425 hADV38S2A0JD32 116 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 ZNF670-ZNF695F2Z2N8 137 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 K7EIL1 84 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 MMP23AO75900 390 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 ALDOBP05062 364 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 PF4V1P10720 104 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 ACTR3P61158 418 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 NXNL2Q5VZ03 156 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 SLC25A26Q70HW3 274 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 SPATA24Q86W54 205 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 TCEANCQ8N8B7 351 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 OR4P4Q8NGL7 312 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 DNAJC9Q8WXX5 260 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 EMG1Q92979 244 aaKnown RBP13.09□□□□□ -0.31
LIG1-205ENST00000593425 MNTQ99583 582 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 CLEC7AQ9BXN2 247 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 TMEM133Q9H2Q1 129 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 CLN6Q9NWW5 311 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 LINC00312Q9Y6C7 94 aa13.09□□□□□ -0.31
LIG1-205ENST00000593425 PSPNO60542 156 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
LIG1-205ENST00000593425 DNAJC8O75937 253 aaPredicted RBP13.08□□□□□ -0.32
LIG1-205ENST00000593425 HAND1O96004 215 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 CD24P25063 80 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 AZGP1P25311 298 aaKnown RBP13.08□□□□□ -0.32
LIG1-205ENST00000593425 EPHA2P29317 976 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 EFNB1P98172 346 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 ZNF91Q05481 1191 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 GRK1Q15835 563 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 BAIAP2L2Q6UXY1 529 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 CCDC121Q6ZUS5 278 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms