RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 KCTD7Q96MP8 289 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RNF2Q99496 336 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 TSC22D3Q99576 134 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 AIF1LQ9BQI0 150 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 TMEM109Q9BVC6 243 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF717Q9BY31 904 aaPredicted RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF430Q9H8G1 570 aaPredicted RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RHOFQ9HBH0 211 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RDH14Q9HBH5 336 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 NRN1Q9NPD7 142 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF391Q9UJN7 358 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 NDRG2Q9UN36 371 aaKnown RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 ACOT9Q9Y305 439 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 NDUFAF1Q9Y375 327 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 RPL36Q9Y3U8 105 aaKnown RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 OR51B4Q9Y5P0 310 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 URB1O60287 2271 aaKnown RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 COL5A1P20908 1838 aaPredicted RBP3.74□□□□□ -1.81
SMAD4-216ENST00000593223 LRRK2Q5S007 2527 aa3.74□□□□□ -1.81
SMAD4-216ENST00000593223 ATAD5Q96QE3 1844 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 A0A0A6YYD4 124 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 TCRBV9S1A1TA0A576 114 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 FAM231BA6NCW3 169 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 FOXI3A8MTJ6 420 aaPredicted RBP3.73□□□□□ -1.81
SMAD4-216ENST00000593223 HACD1B0YJ81 288 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 J3QLI3 93 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 CXCR6O00574 342 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 MPZL2O60487 215 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 CRYZL1O95825 349 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 PPBPP02775 128 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 FCGR3AP08637 254 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 HIST1H1EP10412 219 aaKnown RBP3.73□□□□□ -1.81
SMAD4-216ENST00000593223 UGT2B7P16662 529 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 PVALBP20472 110 aaPredicted RBP3.73□□□□□ -1.81
SMAD4-216ENST00000593223 COX5AP20674 150 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 IL12AP29459 219 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 GCKP35557 465 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 XCR1P46094 333 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 SRP9P49458 86 aaKnown RBP3.73□□□□□ -1.81
SMAD4-216ENST00000593223 SSR4P51571 173 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 FBXW4P57775 412 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 TAS2R39P59534 338 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 RAB8AP61006 207 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 RPL31P62899 125 aaKnown RBP3.73□□□□□ -1.81
SMAD4-216ENST00000593223 ACVR1Q04771 509 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 RUNX3Q13761 415 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 EIF2B1Q14232 305 aaKnown RBP3.73□□□□□ -1.81
SMAD4-216ENST00000593223 ABRAXAS2Q15018 415 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 TTLL9Q3SXZ7 439 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 CPTPQ5TA50 214 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 MARC1Q5VT66 337 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 TMEM42Q69YG0 159 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 MED27Q6P2C8 311 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 MBOAT2Q6ZWT7 520 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 GDPD3Q7L5L3 318 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 SLC36A1Q7Z2H8 476 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 TSEN54Q7Z6J9 526 aaKnown RBP3.73□□□□□ -1.81
SMAD4-216ENST00000593223 NIT1Q86X76 327 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 OR4F17Q8NGA8 305 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 OR10W1Q8NGF6 305 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 OR4F5Q8NH21 305 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 OR51F2Q8NH61 342 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 OR2AE1Q8NHA4 323 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 COQ8AQ8NI60 647 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 SFXN5Q8TD22 340 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 UFD1Q92890 307 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 RAB8BQ92930 207 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 MS4A14Q96JA4 679 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 OLFM3Q96PB7 478 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 OR4F4Q96R69 305 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 PHB2Q99623 299 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 HOPXQ9BPY8 73 aaPredicted RBP3.73□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF670Q9BS34 389 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 CHRNA10Q9GZZ6 450 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 REEP4Q9H6H4 257 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 ACP6Q9NPH0 428 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 IFT46Q9NQC8 304 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 AGPAT4Q9NRZ5 378 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 ABCC13Q9NSE7 274 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 IMPAD1Q9NX62 359 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 TAS2R16Q9NYV7 291 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 ARMCX1Q9P291 453 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 LGALS13Q9UHV8 139 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 KCNIP3Q9Y2W7 256 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 NUBP2Q9Y5Y2 271 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 CENPEQ02224 2701 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 LAMA1P25391 3075 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 OTOGQ6ZRI0 2925 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 TANC1Q9C0D5 1861 aa3.73□□□□□ -1.81
SMAD4-216ENST00000593223 ATMQ13315 3056 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 IGKV6D-41A0A0C4DH26 115 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 OR5B21A6NL26 309 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 EFCAB9A8MZ26 197 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 OR11H12B2RN74 326 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 IDSB3KWA1 339 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 TRDCB7Z8K6 153 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 K7ERI5 159 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 CDC7O00311 574 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 HSD17B6O14756 317 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms