RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 FBN3Q75N90 2809 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 PLCE1Q9P212 2302 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 GABARAPH6UMI1 98 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 PTBP3O95758 552 aaKnown RBP11.42□□□□□ -0.58
VMP1-217ENST00000593168 SFTPBP07988 381 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 MELTFP08582 738 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 OR4A8P0C604 315 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 CD200P41217 278 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 ZNF154Q13106 437 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 ZNF260Q3ZCT1 412 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 TRIQKQ629K1 86 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 ADAM5Q6NVV9 412 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 OSR2Q8N2R0 312 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 SCCPDHQ8NBX0 429 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 C19orf18Q8NEA5 215 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 SMIM4Q8WVI0 70 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 AQP3Q92482 292 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 Q96M66 194 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 GAL3ST1Q99999 423 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 TMEM204Q9BSN7 226 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 TLNRD1Q9H1K6 362 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 AUNIPQ9H7T9 357 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 MTCH1Q9NZJ7 389 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 POLDIP2Q9Y2S7 368 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 RNF115Q9Y4L5 304 aa11.42□□□□□ -0.58
VMP1-217ENST00000593168 AKAP6Q13023 2319 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 A0A0A6YYD4 124 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 A0A1W2PQ09 198 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 ZSCAN5BA6NJL1 495 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 FOXI3A8MTJ6 420 aaPredicted RBP11.41□□□□□ -0.58
VMP1-217ENST00000593168 DEFB108AA8MXU0 73 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 E7EQL1 145 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 F5H5P2 479 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 TRAPPC2LH3BP13 241 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 SULT1C2O00338 296 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 SYNGR1O43759 233 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 LOXP28300 417 aaPredicted RBP11.41□□□□□ -0.58
VMP1-217ENST00000593168 KIR2DL3P43628 341 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 TMEM50BP56557 158 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 DEFA1P59665 94 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 DEFA3P59666 94 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 FGF12P61328 243 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 MAB21L1Q13394 359 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 ARL6IP1Q15041 203 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 NHLRC3Q5JS37 347 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 CELF2-AS1Q8N7Q2 184 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 OR10AD1Q8NGE0 317 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 SETD6Q8TBK2 473 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 FAM222BQ8WU58 562 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 FCAMRQ8WWV6 532 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 YIPF5Q969M3 257 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 TRIM63Q969Q1 353 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 SLAMF9Q96A28 289 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 NICN1Q9BSH3 213 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 SCPEP1Q9HB40 452 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.41□□□□□ -0.58
VMP1-217ENST00000593168 ZDHHC8Q9ULC8 765 aa11.41□□□□□ -0.58
VMP1-217ENST00000593168 RBMX2Q9Y388 322 aaKnown RBP11.41□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A10PA6NDY2 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A18PA6NE21 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A16PA6NEW6 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A20PA6NIJ5 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A8PA6NJQ4 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A7PA6NKC0 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A22PA8MWA6 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A12PA8MX19 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A5PA8MXJ8 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A23PA8MXZ1 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 H3BUI4 141 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 SOCS1O15524 211 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 SIAH2O43255 324 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 NOS1APO75052 506 aaPredicted RBP11.4□□□□□ -0.58
VMP1-217ENST00000593168 GRPP07492 148 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 ADH4P08319 380 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 GSTP1P09211 210 aaKnown RBP11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A15PP0C7V4 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A13PP0C7W8 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A14PP0C7W9 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FAM90A24PP0C7X0 464 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 BCL3P20749 454 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 APOBEC3AP31941 199 aaPredicted RBP11.4□□□□□ -0.58
VMP1-217ENST00000593168 PRSS3P35030 304 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 SERPINF1P36955 418 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 NPBWR2P48146 333 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 DGCR2P98153 550 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 EFNB3Q15768 340 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 NKPD1Q17RQ9 610 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 PNLIPRP3Q17RR3 467 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 RGS21Q2M5E4 152 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 Q6ZTK2 550 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 C11orf53Q8IXP5 236 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 Q8IYB0 196 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 FBXL14Q8N1E6 418 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 CHST4Q8NCG5 386 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 OR2Z1Q8NG97 314 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 OR52I2Q8NH67 350 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 GPX8Q8TED1 209 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 RAB3CQ96E17 227 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 DIRC2Q96SL1 478 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 ST3GAL6Q9Y274 331 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms