RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PTBP3O95758 552 aaKnown RBP6.2□□□□□ -1.42
VMP1-213ENST00000591877 SLC2A1P11166 492 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 CA6P23280 308 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 FMO3P31513 532 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 PAX8Q06710 450 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 ZNF273Q14593 569 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 FAM98BQ52LJ0 330 aaKnown RBP6.2□□□□□ -1.42
VMP1-213ENST00000591877 DRAM2Q6UX65 266 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 ZNF841Q6ZN19 808 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 MRPL21Q7Z2W9 205 aaKnown RBP6.2□□□□□ -1.42
VMP1-213ENST00000591877 CCDC190Q86UF4 302 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 HS3ST5Q8IZT8 346 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 MUC20Q8N307 709 aaPredicted RBP6.2□□□□□ -1.42
VMP1-213ENST00000591877 TEX29Q8N6K0 151 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 IQCF1Q8N6M8 205 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 OR2T33Q8NG76 320 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 GIPC3Q8TF64 312 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 NTN5Q8WTR8 489 aaPredicted RBP6.2□□□□□ -1.42
VMP1-213ENST00000591877 FAM216AQ8WUB2 273 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 DPF1Q92782 380 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 POP5Q969H6 163 aaKnown RBP6.2□□□□□ -1.42
VMP1-213ENST00000591877 SPTSSAQ969W0 71 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 CCDC124Q96CT7 223 aaKnown RBP6.2□□□□□ -1.42
VMP1-213ENST00000591877 ZNF48Q96MX3 618 aaPredicted RBP6.2□□□□□ -1.42
VMP1-213ENST00000591877 AMELYQ99218 206 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 FEVQ99581 238 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 CHID1Q9BWS9 393 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 PRSS22Q9GZN4 317 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 MARCH7Q9H992 704 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 CMC2Q9NRP2 79 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 CENPMQ9NSP4 180 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 UFSP2Q9NUQ7 469 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 ZNF319Q9P2F9 582 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 IL36RNQ9UBH0 155 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 BAIAP2Q9UQB8 552 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 PAM16Q9Y3D7 125 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 PPIAL4AQ9Y536 164 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 SOX21Q9Y651 276 aaPredicted RBP6.2□□□□□ -1.42
VMP1-213ENST00000591877 AUP1Q9Y679 476 aa6.2□□□□□ -1.42
VMP1-213ENST00000591877 PKD1L1Q8TDX9 2849 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 TRAV34A0A0B4J273 112 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 DHRS12A0PJE2 317 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 ZNF878C9JN71 531 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 CST1P01037 141 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 RPS2P15880 293 aaKnown RBP6.19□□□□□ -1.42
VMP1-213ENST00000591877 PRKACGP22612 351 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 SCGB2A2Q13296 93 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 FLOT2Q14254 428 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 RCN1Q15293 331 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 OR8G1Q15617 311 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 KLHL12Q53G59 568 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 C10orf25Q5T742 122 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 ZFP1Q6P2D0 407 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 KCTD18Q6PI47 426 aaPredicted RBP6.19□□□□□ -1.42
VMP1-213ENST00000591877 ZNF826PQ6ZT77 177 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 DPY19L4Q7Z388 723 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 CENPVQ7Z7K6 275 aaPredicted RBP6.19□□□□□ -1.42
VMP1-213ENST00000591877 WDR86Q86TI4 376 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 AQP12AQ8IXF9 295 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 C11orf53Q8IXP5 236 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 TIGD4Q8IY51 512 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 SIGLECL1Q8N7X8 197 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 OR6K6Q8NGW6 343 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 RNF133Q8WVZ7 376 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 SPRYD4Q8WW59 207 aaPredicted RBP6.19□□□□□ -1.42
VMP1-213ENST00000591877 SGK3Q96BR1 496 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 C1orf147Q96MC9 270 aaPredicted RBP6.19□□□□□ -1.42
VMP1-213ENST00000591877 MS4A10Q96PG2 267 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 COPS4Q9BT78 406 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 ABHD6Q9BV23 337 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 SUCNR1Q9BXA5 334 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 CHMP1AQ9HD42 196 aaPredicted RBP6.19□□□□□ -1.42
VMP1-213ENST00000591877 CTSZQ9UBR2 303 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 MIOXQ9UGB7 285 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 NUP50Q9UKX7 468 aa6.19□□□□□ -1.42
VMP1-213ENST00000591877 IGHV2-70DA0A0C4DH43 119 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 KIR2DS1A0A191URI9 304 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 TCRBV3S1A0A5B6 114 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 ARRDC5A6NEK1 342 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 GGT3PA6NGU5 568 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 LRRC30A6NM36 301 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 ANXA2P2A6NMY6 339 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 RIIAD1A6NNX1 92 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 H3BN98 237 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 TRIM77I1YAP6 450 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 SPINT2O43291 252 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 SPRY1O43609 319 aaPredicted RBP6.18□□□□□ -1.42
VMP1-213ENST00000591877 GMDSO60547 372 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 GLCEO94923 617 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 LHBP01229 141 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 IFNGP01579 166 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 IGHV4-38-2P0DP08 117 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 ARSBP15848 533 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 ZNF3P17036 446 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 PITPNBP48739 271 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 CX3CR1P49238 355 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 BLVRAP53004 296 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 GNB2P62879 340 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 UBA52P62987 128 aaKnown RBP6.18□□□□□ -1.42
VMP1-213ENST00000591877 FAM3AP98173 230 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms