RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TMEM225BP0DP42 221 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 SELLP14151 372 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 MPZP25189 248 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 CEBPDP49716 269 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-227ENST00000591849 SNU13P55769 128 aaKnown RBP8.33□□□□□ -1.08
BRCA1-227ENST00000591849 CAV3P56539 151 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 TAS2R43P59537 309 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 PDZK1IP1Q13113 114 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 BAMBIQ13145 260 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 KLF17Q5JT82 389 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-227ENST00000591849 C6orf141Q5SZD1 244 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 USP43Q70EL4 1123 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 FAM58AQ8N1B3 248 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 SIGLECL1Q8N7X8 197 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 LHX4Q969G2 390 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 SDSLQ96GA7 329 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 SPACA5Q96QH8 159 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 DCTN5Q9BTE1 182 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 ELL3Q9HB65 397 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-227ENST00000591849 MTCH1Q9NZJ7 389 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 CKLFQ9UBR5 152 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 TPRKBQ9Y3C4 175 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 MAB21L2Q9Y586 359 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 KPTNQ9Y664 436 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 IGKV1-27A0A075B6S5 117 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 TRBV23-1A0A0A0MS06 115 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 PNMA8CA0A1B0GUJ8 204 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 hCG_1809904A0A1W2PP81 198 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 A0A1W2PPE2 198 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 A0A1W2PR64 198 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 A0A1W2PRV1 198 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 OGG1O15527 345 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 ANGPTL7O43827 346 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 VENTXO95231 258 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 FSHBP01225 129 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 MT-ND2P03891 347 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 CALCBP10092 127 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 PRKACAP17612 351 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 BCL3P20749 454 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 GABRR1P24046 479 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 EEF1B2P24534 225 aaKnown RBP8.32□□□□□ -1.08
BRCA1-227ENST00000591849 C21orf33P30042 268 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-227ENST00000591849 BPIFB3P59826 476 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 ERVK11-1P61568 191 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 RPL31P62899 125 aaKnown RBP8.32□□□□□ -1.08
BRCA1-227ENST00000591849 COL10A1Q03692 680 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 SCN1BQ07699 218 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 IZUMO2Q6UXV1 221 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 BRD3OSQ6XYD6 125 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 GDPD3Q7L5L3 318 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 VMO1Q7Z5L0 202 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 PDZD9Q8IXQ8 264 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 BCL6BQ8N143 479 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-227ENST00000591849 PARP16Q8N5Y8 322 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 CD177Q8N6Q3 437 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 ZFP41Q8N8Y5 198 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 OR5D18Q8NGL1 313 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 PPP1R35Q8TAP8 253 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 TBC1D15Q8TC07 691 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 FBLIM1Q8WUP2 373 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 GHSRQ92847 366 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 DACT3Q96B18 629 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-227ENST00000591849 DMRTB1Q96MA1 342 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 S100A13Q99584 98 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 C19orf24Q9BVV8 132 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 ZNF222Q9UK12 451 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 NBEAL1Q6ZS30 2694 aa8.32□□□□□ -1.08
BRCA1-227ENST00000591849 SH2D1BO14796 132 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 ATP6V1G2O95670 118 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 HAND1O96004 215 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 CDK1P06493 297 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 DUSP1P28562 367 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 WNT4P56705 351 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 EDDM3BP56851 147 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 HILS1P60008 231 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 ACTG1P63261 375 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 GUCA2AQ02747 115 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 KISS1Q15726 138 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 KRTAP24-1Q3LI83 254 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 XAF1Q6GPH4 301 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 KIR3DL3Q8N743 410 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 LY6G5BQ8NDX9 201 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 OR4M1Q8NGD0 313 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 OR5D13Q8NGL4 314 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 TMEM106AQ96A25 262 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 SMIM19Q96E16 107 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 TBX15Q96SF7 602 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 CCDC90BQ9GZT6 254 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 FAM192AQ9GZU8 254 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 SIRPDQ9H106 197 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 HES4Q9HCC6 221 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 SIRT7Q9NRC8 400 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 RBFOX1Q9NWB1 397 aaKnown RBP8.31□□□□□ -1.08
BRCA1-227ENST00000591849 TAS2R4Q9NYW5 299 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 ING4Q9UNL4 249 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 GSTK1Q9Y2Q3 226 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 FAM96BQ9Y3D0 163 aa8.31□□□□□ -1.08
BRCA1-227ENST00000591849 SIRT4Q9Y6E7 314 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-227ENST00000591849 IGHV1-69DA0A0B4J2H0 117 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 CENPVL3A0A0U1RRI6 287 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms