RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 GRPP07492 148 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 FBP1P09467 338 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 HSMCR30P0CW71 290 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 SMIM18P0DKX4 95 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 MMP9P14780 707 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 MUC1P15941 1255 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-226ENST00000591534 CFL1P23528 166 aaKnown RBP7.79□□□□□ -1.16
BRCA1-226ENST00000591534 C21orf33P30042 268 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-226ENST00000591534 GABRA5P31644 462 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 SOX6P35712 828 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 NAA10P41227 235 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-226ENST00000591534 IER3P46695 156 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 CCR9P51686 369 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 CAPZA1P52907 286 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 GP2P55259 537 aaKnown RBP7.79□□□□□ -1.16
BRCA1-226ENST00000591534 ARF6P62330 175 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 TPBGQ13641 420 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 MPPED2Q15777 294 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 MICBQ29980 383 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 CDONQ4KMG0 1287 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 RUSC1-AS1Q66K80 236 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 DHRS7BQ6IAN0 325 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-226ENST00000591534 LAIR2Q6ISS4 152 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 ZNF322Q6U7Q0 402 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-226ENST00000591534 CFAP77Q6ZQR2 320 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 LINC00299Q6ZSB3 139 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 BTN2A1Q7KYR7 527 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 SLC36A1Q7Z2H8 476 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 KRT77Q7Z794 578 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 LDLRAD3Q86YD5 345 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 ANKRD13BQ86YJ7 626 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 LINC00346Q8IVM7 164 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 TIGD4Q8IY51 512 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 FTMTQ8N4E7 242 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 OR8S1Q8NH09 359 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 LINC01006Q8NI28 216 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 THEM6Q8WUY1 208 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 TAF15Q92804 592 aaKnown RBP eCLIP7.79□□□□□ -1.166e-6■□□□□ 11.2
BRCA1-226ENST00000591534 KIRREL1Q96J84 757 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 TBX15Q96SF7 602 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 KAAG1Q9UBP8 84 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 IKZF2Q9UKS7 526 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 A0A1W2PQL4 384 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-226ENST00000591534 C5orf63A6NC05 138 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 DVL1O14640 695 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 XRCC2O43543 280 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 GATBO75879 557 aaKnown RBP7.78□□□□□ -1.16
BRCA1-226ENST00000591534 PAHP00439 452 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 IGHV4-59P01825 116 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 GYPAP02724 150 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 CD2P06729 351 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 HTR1AP08908 422 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 SPARCP09486 303 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 ALOX5APP20292 161 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 HSD11B1P28845 292 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 PYCR1P32322 319 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 TGFBR2P37173 567 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 SCAND1P57086 179 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 ERVFRD-1P60508 538 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 SRSF4Q08170 494 aaKnown RBP7.78□□□□□ -1.16
BRCA1-226ENST00000591534 RSPO1Q2MKA7 263 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-226ENST00000591534 YIF1BQ5BJH7 314 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 LINC01590Q5TEZ4 76 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 TEX36Q5VZQ5 186 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 XAF1Q6GPH4 301 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 ASPHD2Q6ICH7 369 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 C11orf88Q6PI97 169 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 ZSCAN4Q8NAM6 433 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-226ENST00000591534 C19orf18Q8NEA5 215 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 OR51L1Q8NGJ5 315 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 OR5R1Q8NH85 324 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 ST8SIA4Q92187 359 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 C12orf43Q96C57 262 aaKnown RBP7.78□□□□□ -1.16
BRCA1-226ENST00000591534 CPNE2Q96FN4 548 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-226ENST00000591534 SIRPDQ9H106 197 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 C16orf95Q9H693 158 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 ZMAT4Q9H898 229 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 MRPL22Q9NWU5 206 aaKnown RBP7.78□□□□□ -1.16
BRCA1-226ENST00000591534 NDUFB11Q9NX14 153 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 CTSZQ9UBR2 303 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 RPUSD1Q9UJJ7 312 aaKnown RBP7.78□□□□□ -1.16
BRCA1-226ENST00000591534 VWFP04275 2813 aa7.78□□□□□ -1.16
BRCA1-226ENST00000591534 A0A0U1RQK1 487 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 SCO2A0A1W2PP80 73 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 ANKRD61A6NGH8 418 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 TVP23AA6NH52 213 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 NDUFB3O43676 98 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 AIREO43918 545 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 INMTO95050 263 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 GYPBP06028 91 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 H2BFMP0C1H6 154 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 UBCP0CG48 685 aaKnown RBP7.77□□□□□ -1.17
BRCA1-226ENST00000591534 LIMS3P0CW19 117 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 LIMS4P0CW20 117 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 CLUP10909 449 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 CD36P16671 472 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 GNALP38405 381 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 GTF2A1P52655 376 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-226ENST00000591534 PROK1P58294 105 aa7.77□□□□□ -1.17
BRCA1-226ENST00000591534 ZNF92Q03936 586 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms