RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 FAM90A24PP0C7X0 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FUT3P21217 361 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 RBM11P57052 281 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 NAAAQ02083 359 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 SNTB1Q13884 538 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 PIGYQ3MUY2 71 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 PAN3Q58A45 887 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 TMEM211Q6ICI0 200 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 MRPL21Q7Z2W9 205 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 SAXO1Q8IYX7 474 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 RELL2Q8NC24 303 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 BVESQ8NE79 360 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 STOML3Q8TAV4 291 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 C17orf50Q8WW18 174 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 DNAJB11Q9UBS4 358 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 TMA7Q9Y2S6 64 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 KCNIP3Q9Y2W7 256 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 C5orf49A4QMS7 147 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 B8ZZF3 427 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 F8VVB4 439 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 F8VWA3 439 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 TPD52L2O43399 206 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 PTGER4P35408 488 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 C9orf135Q5VTT2 229 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 ZNF611Q8N823 705 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 POC1AQ8NBT0 407 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 Q8NFD4 153 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 PIK3IP1Q96FE7 263 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 CRYM-AS1A6NIL9 109 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 ZSCAN5BA6NJL1 495 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 IFNA21P01568 189 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 HLA-HP01893 362 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 SFTPBP07988 381 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 CD79AP11912 226 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 TPT1P13693 172 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 CCNOP22674 350 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 OPRM1P35372 400 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 RRADP55042 308 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 ZFP62Q8NB50 900 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 OR56B2PQ8NGI1 322 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 ZNF75AQ96N20 296 aa16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 PAPOLGQ9BWT3 736 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-209ENST00000589838 PQLC2LA1A4F0 135 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 CST4P01036 141 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 HOXB5P09067 269 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 ZNF728P0DKX0 622 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 RAB1AP62820 205 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 SLC25A26Q70HW3 274 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 CCDC120Q96HB5 630 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 OR10C1Q96KK4 312 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 DMRTA2Q96SC8 542 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 C12orf4Q9NQ89 552 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 PRDX4Q13162 271 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 IL15RAQ13261 267 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 ABCA11PQ4W5N1 156 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 CCDC36Q8IYA8 594 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 ZDHHC23Q8IYP9 409 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 NAXEQ8NCW5 288 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 SHARPINQ9H0F6 387 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 LDAHQ9H6V9 325 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 ZNF442Q9H7R0 627 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 PRR13Q9NZ81 148 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 GPR160Q9UJ42 338 aa16.54■□□□□ 0.24
PRKCSH-209ENST00000589838 H0YIZ8 118 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 CD82P27701 267 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 GLP1RP43220 463 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 CEACAM21Q3KPI0 293 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM209AQ5JX71 171 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 ELP2Q6IA86 826 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 SLC22A25Q6T423 547 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 CALHM1Q8IU99 346 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 LINC00052Q96N35 136 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 AQP10Q96PS8 301 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 HIST1H2AAQ96QV6 131 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 GLS2Q9UI32 602 aa16.53■□□□□ 0.24
PRKCSH-209ENST00000589838 MSTNO14793 375 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 UCP3P55916 312 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 RBM39Q14498 530 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM74A1Q5RGS3 127 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 UNQ6126/PRO20091Q6UXV3 157 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 TMEM200AQ86VY9 491 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 MKXQ8IYA7 352 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 TMEM178AQ8NBL3 297 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 POM121L2Q96KW2 1035 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 SYT3Q9BQG1 590 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 GP6Q9HCN6 339 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 GSKIPQ9P0R6 139 aa16.52■□□□□ 0.24
PRKCSH-209ENST00000589838 PIGPP57054 158 aa16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 EIF5AP63241 154 aaKnown RBP16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 RAB32Q13637 225 aa16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 TRIP6Q15654 476 aaKnown RBP16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 NUFIP2Q7Z417 695 aaKnown RBP16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 BAP18Q8IXM2 172 aa16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 GALNT11Q8NCW6 608 aa16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 SLC30A7Q8NEW0 376 aa16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 NANOS1Q8WY41 292 aaKnown RBP16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 C1QTNF6Q9BXI9 259 aa16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 FAM86C1Q9NVL1 165 aa16.52■□□□□ 0.23
PRKCSH-209ENST00000589838 ZNF581Q9P0T4 197 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms