RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 NUMA1Q14980 2115 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 ZNF141Q15928 474 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 RTN4RL1Q86UN2 441 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 LRRC3BQ96PB8 259 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 SDHCQ99643 169 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 GGACTQ9BVM4 153 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 NAGKQ9UJ70 344 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 A8MXK9 166 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 CA3P07451 260 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 MPV17LQ2QL34 196 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 C17orf78Q8N4C9 275 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 GALMQ96C23 342 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 GSN-AS1Q9NRJ2 163 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 DOCK2Q92608 1830 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 NUP205Q92621 2012 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 A6NDN8 102 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 NKX6-3A6NJ46 265 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 LYRM7Q5U5X0 104 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 RHOBP62745 196 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 ZNF816Q0VGE8 651 aaPredicted RBP13□□□□□ -0.33
SMARCA4-214ENST00000589677 CACNG5Q9UF02 275 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 G3V3Y1 287 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 BCAT2O15382 392 aaPredicted RBP13□□□□□ -0.33
SMARCA4-214ENST00000589677 PDCD6O75340 191 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 TRGC2P03986 189 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 FCARP24071 287 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 SLC35E3Q7Z769 313 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 C11orf42Q8N5U0 333 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 MRPL24Q96A35 216 aaKnown RBP13□□□□□ -0.33
SMARCA4-214ENST00000589677 SIGLEC5O15389 551 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 ST6GAL1P15907 406 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 PPP2CBP62714 309 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 PPP2CAP67775 309 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 SIGLEC14Q08ET2 396 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 AMER3Q8N944 861 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 HIST1H2BAQ96A08 127 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 ZNF707Q96C28 371 aaPredicted RBP13□□□□□ -0.33
SMARCA4-214ENST00000589677 ACY3Q96HD9 319 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 PRR13Q9NZ81 148 aa13□□□□□ -0.33
SMARCA4-214ENST00000589677 C11orf94C9JXX5 98 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 BMPR1BO00238 502 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 PDE6DO43924 150 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 PIAS2O75928 621 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 OR2A4O95047 310 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 TAS2R60P59551 318 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 MICBQ29980 383 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 OR2A7Q96R45 310 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 DDA1Q9BW61 102 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 WDR61Q9GZS3 305 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 SIRT4Q9Y6E7 314 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 PDE4DIPQ5VU43 2346 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 SHROOM3Q8TF72 1996 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 KIF13BQ9NQT8 1826 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 CD46P15529 392 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 HLA-BQ31612 363 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 ZNF880Q6PDB4 577 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 OR13H1Q8NG92 308 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 VN1R17PQ8TDU5 208 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 MUCL1Q96DR8 90 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 THOC3Q96J01 351 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 OR6C1Q96RD1 312 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 GINS3Q9BRX5 216 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 ZNF835Q9Y2P0 537 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 SEMA7AO75326 666 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 RECKO95980 971 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 PGA4P0DJD7 388 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 PGA5P0DJD9 388 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 VDAC1P21796 283 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 ADPRHP54922 357 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 OR1P1Q8NH06 330 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 ROBO4Q8WZ75 1007 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 COMMD5Q9GZQ3 224 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 TRAV8-7A0A075B6U6 113 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 SPINK4O60575 86 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 DEFA4P12838 97 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 AGFG1P52594 562 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 PRICKLE4Q2TBC4 344 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 C20orf196Q8IYI0 205 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 H1FOOQ8IZA3 346 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 OR1L6Q8NGR2 347 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 EID2BQ96D98 161 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 NDFIP1Q9BT67 221 aa12.99□□□□□ -0.33
SMARCA4-214ENST00000589677 HOXA6P31267 233 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 CDAP32320 146 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 SKP2Q13309 424 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 GGTLC2Q14390 218 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 OR10G3Q8NGC4 313 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 UTP23Q9BRU9 249 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 HCFC2Q9Y5Z7 792 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 IGHV3-20A0A0C4DH32 117 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 HSPB1P04792 205 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 SRP14P37108 136 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 FOXF1Q12946 379 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 Q5BKY6 102 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 LAMTOR1Q6IAA8 161 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 OR5AS1Q8N127 324 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 C5orf49A4QMS7 147 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 DIRC3C9JPN6 131 aa12.98□□□□□ -0.33
SMARCA4-214ENST00000589677 SYNGR2O43760 224 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms