RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ACTA1P68133 377 aa11.28□□□□□ -0.6
DNMT1-213ENST00000587604 SLC34A1Q06495 639 aa11.28□□□□□ -0.6
DNMT1-213ENST00000587604 HS3ST5Q8IZT8 346 aa11.28□□□□□ -0.6
DNMT1-213ENST00000587604 OR8H2Q8N162 312 aa11.28□□□□□ -0.6
DNMT1-213ENST00000587604 ZNF714Q96N38 554 aa11.28□□□□□ -0.6
DNMT1-213ENST00000587604 GTF2A1LQ9UNN4 478 aa11.28□□□□□ -0.6
DNMT1-213ENST00000587604 R4GMQ9 66 aa11.28□□□□□ -0.6
DNMT1-213ENST00000587604 A0A1W2PRX2 142 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 hADV38S2A0JD32 116 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 A6NIN4 97 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 PF4V1P10720 104 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 JUNBP17275 347 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-213ENST00000587604 HOXB6P17509 224 aaKnown RBP11.27□□□□□ -0.61
DNMT1-213ENST00000587604 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 BCL2L15Q5TBC7 163 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 ZNF322Q6U7Q0 402 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-213ENST00000587604 TCF23Q7RTU1 214 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 CENPVQ7Z7K6 275 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-213ENST00000587604 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 SNX22Q96L94 193 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 CNN2Q99439 309 aaKnown RBP11.27□□□□□ -0.61
DNMT1-213ENST00000587604 MNTQ99583 582 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 APOL4Q9BPW4 351 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 TTTY10Q9BZA0 68 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.27□□□□□ -0.61
DNMT1-213ENST00000587604 MTCH1Q9NZJ7 389 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 OR52A1Q9UKL2 312 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 SLC7A11Q9UPY5 501 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 SNX5Q9Y5X3 404 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 SESN1Q9Y6P5 492 aa11.27□□□□□ -0.61
DNMT1-213ENST00000587604 IGHV2-26A0A0B4J1V2 119 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 AQP12BA6NM10 295 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 F8VVB4 439 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 F8VWA3 439 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 K7EIL1 84 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 ATP8B1O43520 1251 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 DNAJC8O75937 253 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-213ENST00000587604 CXCR4P61073 352 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 IL18R1Q13478 541 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 TCTEX1D4Q5JR98 221 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 ZBTB49Q6ZSB9 765 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 C16orf82Q7Z2V1 217 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 AQP12AQ8IXF9 295 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 ZNF676Q8N7Q3 588 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 NDNFQ8TB73 568 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 TRMT10AQ8TBZ6 339 aaKnown RBP11.26□□□□□ -0.61
DNMT1-213ENST00000587604 CCDC124Q96CT7 223 aaKnown RBP11.26□□□□□ -0.61
DNMT1-213ENST00000587604 CEP19Q96LK0 163 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 CLEC7AQ9BXN2 247 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 SEBOXQ9HB31 216 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-213ENST00000587604 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-213ENST00000587604 TSSC4Q9Y5U2 329 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-213ENST00000587604 LINC00312Q9Y6C7 94 aa11.26□□□□□ -0.61
DNMT1-213ENST00000587604 FAM230AA0A1W2PPH8 454 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 TCRBV4S1A1TA0A5B7 111 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 TMEM82A0PJX8 343 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 MAGEB4O15481 346 aaPredicted RBP11.25□□□□□ -0.61
DNMT1-213ENST00000587604 DUS4LO95620 317 aaKnown RBP11.25□□□□□ -0.61
DNMT1-213ENST00000587604 CCL1P22362 96 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 CALB2P22676 271 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 HTR1DP28221 377 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 CRISP1P54107 249 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 GNGT1P63211 74 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 SLC35A2P78381 396 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 EDDM3AQ14507 147 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 PLEKHG7Q6ZR37 379 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 MEPCEQ7L2J0 689 aaKnown RBP11.25□□□□□ -0.61
DNMT1-213ENST00000587604 EGFL6Q8IUX8 553 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 DNAJC9Q8WXX5 260 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 RCC1LQ96I51 464 aaKnown RBP11.25□□□□□ -0.61
DNMT1-213ENST00000587604 AKR1E2Q96JD6 320 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 CADM1Q9BY67 442 aaKnown RBP11.25□□□□□ -0.61
DNMT1-213ENST00000587604 TMEM133Q9H2Q1 129 aa11.25□□□□□ -0.61
DNMT1-213ENST00000587604 MRM2Q9UI43 246 aaKnown RBP11.25□□□□□ -0.61
DNMT1-213ENST00000587604 PRKYO43930 277 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 PF4P02776 101 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 PEX2P28328 305 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 FUT6P51993 359 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 PTGES3Q15185 160 aaKnown RBP11.24□□□□□ -0.61
DNMT1-213ENST00000587604 UBE2V2Q15819 145 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 DEFB121Q5J5C9 76 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 SLX4IPQ5VYV7 408 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 CCDC121Q6ZUS5 278 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 SLC35F2Q8IXU6 374 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 ENTHD1Q8IYW4 607 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 TPRX1Q8N7U7 411 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 OR52N4Q8NGI2 321 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 SLAMF9Q96A28 289 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 LIN7BQ9HAP6 207 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 ADGRL4Q9HBW9 690 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 PAPOLBQ9NRJ5 636 aaKnown RBP11.24□□□□□ -0.61
DNMT1-213ENST00000587604 CLN6Q9NWW5 311 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 H2AFY2Q9P0M6 372 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-213ENST00000587604 DPM3Q9P2X0 92 aa11.24□□□□□ -0.61
DNMT1-213ENST00000587604 IGKV1-27A0A075B6S5 117 aa11.23□□□□□ -0.61
DNMT1-213ENST00000587604 ZNF670-ZNF695F2Z2N8 137 aa11.23□□□□□ -0.61
DNMT1-213ENST00000587604 GATBO75879 557 aaKnown RBP11.23□□□□□ -0.61
DNMT1-213ENST00000587604 HAND1O96004 215 aa11.23□□□□□ -0.61
DNMT1-213ENST00000587604 IGHA1P01876 353 aa11.23□□□□□ -0.61
DNMT1-213ENST00000587604 T-ENOLP0DO92 83 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms