RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 J3QT63 122 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 CSN2P05814 226 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 NAT1P18440 290 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 IGFBP7Q16270 282 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 IDO2Q6ZQW0 420 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 WDR86Q86TI4 376 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 OR4K15Q8NH41 348 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 EMG1Q92979 244 aaKnown RBP16.92■□□□□ 0.3
TRIM47-204ENST00000587339 ST6GALNAC5Q9BVH7 336 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 BEX2Q9BXY8 128 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 GHITMQ9H3K2 345 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 BEX1Q9HBH7 125 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A10PA6NDY2 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A18PA6NE21 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A16PA6NEW6 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A20PA6NIJ5 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A8PA6NJQ4 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A7PA6NKC0 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A22PA8MWA6 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A12PA8MX19 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A5PA8MXJ8 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A23PA8MXZ1 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 H0YL77 283 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A15PP0C7V4 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A13PP0C7W8 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A14PP0C7W9 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 FAM90A24PP0C7X0 464 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 ZNF735P0CB33 412 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 MRPS15P82914 257 aaKnown RBP16.92■□□□□ 0.3
TRIM47-204ENST00000587339 CBX3Q13185 183 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 PDCD1Q15116 288 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 SCGB2B2Q4G0G5 96 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 NHLRC3Q5JS37 347 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 SEZ6L2Q6UXD5 910 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 KDF1Q8NAX2 398 aaPredicted RBP16.92■□□□□ 0.3
TRIM47-204ENST00000587339 OR6F1Q8NGZ6 308 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 DACT3Q96B18 629 aaPredicted RBP16.92■□□□□ 0.3
TRIM47-204ENST00000587339 SLC6A7Q99884 636 aa16.92■□□□□ 0.3
TRIM47-204ENST00000587339 PRSS44E7EML9 344 aa16.91■□□□□ 0.3
TRIM47-204ENST00000587339 PRAF2O60831 178 aa16.91■□□□□ 0.3
TRIM47-204ENST00000587339 PDCD6O75340 191 aa16.91■□□□□ 0.3
TRIM47-204ENST00000587339 RHBDL1O75783 438 aa16.91■□□□□ 0.3
TRIM47-204ENST00000587339 SNU13P55769 128 aaKnown RBP16.91■□□□□ 0.3
TRIM47-204ENST00000587339 RRAS2P62070 204 aaPredicted RBP16.91■□□□□ 0.3
TRIM47-204ENST00000587339 ZNF154Q13106 437 aa16.91■□□□□ 0.3
TRIM47-204ENST00000587339 HOGA1Q86XE5 327 aa16.91■□□□□ 0.3
TRIM47-204ENST00000587339 PRRT1Q99946 306 aa16.91■□□□□ 0.3
TRIM47-204ENST00000587339 SLC25A21Q9BQT8 299 aaPredicted RBP16.91■□□□□ 0.3
TRIM47-204ENST00000587339 SULT4A1Q9BR01 284 aa16.91■□□□□ 0.3
TRIM47-204ENST00000587339 ZNF701Q9NV72 531 aaPredicted RBP16.91■□□□□ 0.3
TRIM47-204ENST00000587339 ZNF230Q9UIE0 474 aaPredicted RBP16.91■□□□□ 0.3
TRIM47-204ENST00000587339 OSGIN2Q9Y236 505 aa16.91■□□□□ 0.3
TRIM47-204ENST00000587339 TMEM210A6NLX4 147 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 PYCARD-AS1I3L0S3 204 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 MLNRO43193 412 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 IFNA6P05013 189 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 FUT3P21217 361 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 CD40P25942 277 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 GLRXP35754 106 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 ACTBL2Q562R1 376 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 ATAD3CQ5T2N8 411 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 SCCPDHQ8NBX0 429 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 BEST4Q8NFU0 473 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 ZNF488Q96MN9 340 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 HS3ST6Q96QI5 342 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 CMSS1Q9BQ75 279 aaKnown RBP16.9■□□□□ 0.3
TRIM47-204ENST00000587339 PLK3Q9H4B4 646 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 SLC2A8Q9NY64 477 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 DUSP13Q9UII6 198 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 AK3Q9UIJ7 227 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 POLDIP2Q9Y2S7 368 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 ATP6V1G2-DDX39BF2Z307 99 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 CCL21O00585 134 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 PMP2P02689 132 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 PRKACAP17612 351 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 AMY2BP19961 511 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 NKX6-1P78426 367 aaPredicted RBP16.9■□□□□ 0.3
TRIM47-204ENST00000587339 DAZAP2Q15038 168 aaPredicted RBP16.9■□□□□ 0.3
TRIM47-204ENST00000587339 MICBQ29980 383 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 BRICD5Q6PL45 260 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 TMEM108Q6UXF1 575 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 SSX8Q7RTT4 187 aa16.9■□□□□ 0.3
TRIM47-204ENST00000587339 HDHD3Q9BSH5 251 aaPredicted RBP16.9■□□□□ 0.3
TRIM47-204ENST00000587339 ATRXP46100 2492 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 A0A1B0GUH1 482 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 CDIPTO14735 213 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 RLN1P04808 185 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 GRPP07492 148 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 ANXA7P20073 488 aaKnown RBP16.89■□□□□ 0.29
TRIM47-204ENST00000587339 MECP2P51608 486 aaKnown RBP16.89■□□□□ 0.29
TRIM47-204ENST00000587339 ZMYND11Q15326 602 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 MPV17LQ2QL34 196 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 Q6ZR03 302 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 OR13G1Q8NGZ3 307 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 OR51J1Q9H342 316 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 RHOFQ9HBH0 211 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 MSL2Q9HCI7 577 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 IL36RNQ9UBH0 155 aa16.89■□□□□ 0.29
TRIM47-204ENST00000587339 HEATR1Q9H583 2144 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms