RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP22.39■■□□□ 1.17
SMARCD2-210ENST00000584400 OR13C9Q8NGT0 318 aa22.39■■□□□ 1.17
SMARCD2-210ENST00000584400 OR52N1Q8NH53 320 aa22.39■■□□□ 1.17
SMARCD2-210ENST00000584400 TFAP2CQ92754 450 aa22.39■■□□□ 1.17
SMARCD2-210ENST00000584400 GGHQ92820 318 aa22.39■■□□□ 1.17
SMARCD2-210ENST00000584400 ZDHHC16Q969W1 377 aa22.39■■□□□ 1.17
SMARCD2-210ENST00000584400 IGHV1-69DA0A0B4J2H0 117 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 H0YJX3 145 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 IGHV1-69P01742 117 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 CD2P06729 351 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 GNAO1P09471 354 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 GTF2A1P52655 376 aaPredicted RBP22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 UBA52P62987 128 aaKnown RBP22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 GUCA2AQ02747 115 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 ST3GAL4Q11206 333 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 CDK5R1Q15078 307 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 OR2G6Q5TZ20 316 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 METAP1DQ6UB28 335 aaPredicted RBP22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 BATF2Q8N1L9 274 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 GPR148Q8TDV2 347 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 EMG1Q92979 244 aaKnown RBP22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 ZNF48Q96MX3 618 aaPredicted RBP22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 VCX3BQ9H321 246 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 ESM1Q9NQ30 184 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 PLCXD1Q9NUJ7 323 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 NKX1-2Q9UD57 310 aaPredicted RBP22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 GLS2Q9UI32 602 aa22.38■■□□□ 1.17
SMARCD2-210ENST00000584400 DOCK11Q5JSL3 2073 aa22.37■■□□□ 1.17
SMARCD2-210ENST00000584400 PRTN3P24158 256 aa22.37■■□□□ 1.17
SMARCD2-210ENST00000584400 METTL8Q9H825 291 aaKnown RBP22.37■■□□□ 1.17
SMARCD2-210ENST00000584400 RHOFQ9HBH0 211 aa22.37■■□□□ 1.17
SMARCD2-210ENST00000584400 NOX4Q9NPH5 578 aa22.37■■□□□ 1.17
SMARCD2-210ENST00000584400 CLDN34H7C241 214 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 MAGEB3O15480 346 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 SULT1B1O43704 296 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 TK1P04183 234 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 HCKP08631 526 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 PDZK1IP1Q13113 114 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 NCR3LG1Q68D85 454 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 FAM185AQ8N0U4 392 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 STX19Q8N4C7 294 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 FBLIM1Q8WUP2 373 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 SLC25A28Q96A46 364 aa22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 SEBOXQ9HB31 216 aaPredicted RBP22.36■■□□□ 1.17
SMARCD2-210ENST00000584400 COL6A5A8TX70 2615 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 hCG_1809904A0A1W2PP81 198 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 A0A1W2PPE2 198 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 A0A1W2PR64 198 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 A0A1W2PRV1 198 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 H0YHG0 523 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 INMTO95050 263 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 EEF1B2P24534 225 aaKnown RBP22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 CEBPDP49716 269 aaPredicted RBP22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 RPL31P62899 125 aaKnown RBP22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 ASCC1Q8N9N2 400 aaKnown RBP22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 BPIFB6Q8NFQ5 453 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 RPS4Y2Q8TD47 263 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 GCDHQ92947 438 aaPredicted RBP22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 SMIM19Q96E16 107 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 PRDM13Q9H4Q3 707 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 ELL3Q9HB65 397 aaPredicted RBP22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 PSORS1C1Q9UIG5 152 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 PCDHGB5Q9Y5G0 923 aa22.35■■□□□ 1.17
SMARCD2-210ENST00000584400 DNAJC9-AS1A6NH13 148 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 K7N7A8 449 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 OGG1O15527 345 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 RAB3AP20336 220 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 TAS2R43P59537 309 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 COL10A1Q03692 680 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 DEFB112Q30KQ8 113 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 SPIN3Q5JUX0 258 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 RUSC1-AS1Q66K80 236 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 SAXO1Q8IYX7 474 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 FAM58AQ8N1B3 248 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 OR5D13Q8NGL4 314 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 UNKLQ9H9P5 680 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 SIRT7Q9NRC8 400 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 CLEC2DQ9UHP7 191 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 ZNF281Q9Y2X9 895 aa22.34■■□□□ 1.17
SMARCD2-210ENST00000584400 F8VVB4 439 aa22.33■■□□□ 1.17
SMARCD2-210ENST00000584400 F8VWA3 439 aa22.33■■□□□ 1.17
SMARCD2-210ENST00000584400 SPRY1O43609 319 aaPredicted RBP22.33■■□□□ 1.17
SMARCD2-210ENST00000584400 AHSA2Q719I0 299 aa22.33■■□□□ 1.17
SMARCD2-210ENST00000584400 Q8N7P7 452 aa22.33■■□□□ 1.17
SMARCD2-210ENST00000584400 ZSCAN4Q8NAM6 433 aaPredicted RBP22.33■■□□□ 1.17
SMARCD2-210ENST00000584400 PPP1R35Q8TAP8 253 aa22.33■■□□□ 1.17
SMARCD2-210ENST00000584400 MYL12BO14950 172 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 XPNPEP2O43895 674 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 RNASE1P07998 156 aaKnown RBP22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 BCL3P20749 454 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 SOX2P48431 317 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 KISS1Q15726 138 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 XAF1Q6GPH4 301 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 C12orf54Q6X4T0 127 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 GDPD3Q7L5L3 318 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 RFT1Q96AA3 541 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 SNX22Q96L94 193 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 C19orf12Q9NSK7 152 aa22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 RBFOX1Q9NWB1 397 aaKnown RBP22.32■■□□□ 1.16
SMARCD2-210ENST00000584400 KDM4BO94953 1096 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms