RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ITLN2Q8WWU7 325 aaPredicted RBP1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 METTL26Q96S19 204 aa1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 PKMYT1Q99640 499 aa1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 ABCG5Q9H222 651 aa1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 GAL3ST2Q9H3Q3 398 aa1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 TAC3Q9UHF0 121 aa1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 CHTOPQ9Y3Y2 248 aaKnown RBP1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 TRAPPC1Q9Y5R8 145 aa1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 KPTNQ9Y664 436 aa1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 R4GN34 69 aa1.81□□□□□ -2.12
PPP4R1-227ENST00000583988 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 MIA3Q5JRA6 1907 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 PLXNB3Q9ULL4 1909 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 E7EWF7 191 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 K7EPK0 472 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 UPK2O00526 184 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 KDELR3O43731 214 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 GMDSO60547 372 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 OR2A4O95047 310 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 SEC11BP0C7V7 166 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 ENDOGQ14249 297 aaKnown RBP1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 PMVKQ15126 192 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 ZNF470Q6ECI4 717 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 SMARCD3Q6STE5 483 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 UGT2A3Q6UWM9 527 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 CPNE9Q8IYJ1 553 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 OR4C13Q8NGP0 309 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 MITD1Q8WV92 249 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 ZCCHC13Q8WW36 166 aaKnown RBP1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 PPP1R36Q96LQ0 422 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 OR2A7Q96R45 310 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 BCL7BQ9BQE9 202 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 C20orf144Q9BQM9 153 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 VSIRQ9H7M9 311 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 ASF1BQ9NVP2 202 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 VAPAQ9P0L0 249 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 ZNF230Q9UIE0 474 aaPredicted RBP1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 RAB23Q9ULC3 237 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 KLF13Q9Y2Y9 288 aaPredicted RBP1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 INSIG2Q9Y5U4 225 aa1.8□□□□□ -2.12
PPP4R1-227ENST00000583988 LOC100653049A0A140TA62 436 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 OR2AT4A6NND4 320 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 H3BQ85 93 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 KRT34O76011 436 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 CXorf1O96002 111 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 STAG3L2P0CL84 134 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 CPN2P22792 545 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 GPR4P46093 362 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 IFFO1Q0D2I5 559 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 ZNF404Q494X3 552 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 LINC00337Q8N6G1 96 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 OR13C9Q8NGT0 318 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 OR6N2Q8NGY6 317 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 OR51Q1Q8NH59 317 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 PLA2G12AQ9BZM1 189 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 PORCNQ9H237 461 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 C12orf4Q9NQ89 552 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 ZNF586Q9NXT0 402 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 ZNF780BQ9Y6R6 833 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 PRR14LQ5THK1 2151 aa1.79□□□□□ -2.12
PPP4R1-227ENST00000583988 CD300LBA8K4G0 201 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 PRMT5O14744 637 aaPredicted RBP1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 RNF113AO15541 343 aaKnown RBP1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 FMODQ06828 376 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 TAL2Q16559 108 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 LDLRAD2Q5SZI1 272 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 Q6ZQT7 251 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 CCNYL1Q8N7R7 359 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 SHCBP1LQ9BZQ2 653 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 TM6SF2Q9BZW4 377 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 SYT4Q9H2B2 425 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 SLC38A1Q9H2H9 487 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 TMEM38BQ9NVV0 291 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 ANXA10Q9UJ72 324 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 MCTS1Q9ULC4 181 aaKnown RBP1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 V9GYY9 64 aa1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 FBN1P35555 2871 aaKnown RBP1.78□□□□□ -2.12
PPP4R1-227ENST00000583988 TRIOBPQ9H2D6 2365 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 SLC5A10A0PJK1 596 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 LEUTXA8MZ59 168 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 H0YC42 278 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 SLC31A1O15431 190 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 CPSF4O95639 269 aaKnown RBP1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 HLA-AP01891 365 aaKnown RBP1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 CDK1P06493 297 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 MLNP12872 115 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 BGNP21810 368 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 HTR2CP28335 458 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 IMPA1P29218 277 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 FOXA1P55317 472 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 DSTNP60981 165 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 IL5RAQ01344 420 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 TNFRSF9Q07011 255 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 DYNC1I2Q13409 638 aaKnown RBP1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 VAMP3Q15836 100 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 SSX1Q16384 188 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 HNRNPA1L2Q32P51 320 aaKnown RBP1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 ZNF660Q6AZW8 331 aaPredicted RBP1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 AMN1Q8IY45 258 aa1.77□□□□□ -2.13
PPP4R1-227ENST00000583988 FAM58AQ8N1B3 248 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms