RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 LIMS4P0CW20 117 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 ATF1P18846 271 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 IER3P46695 156 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 RPL31P62899 125 aaKnown RBP8.11□□□□□ -1.11
SKA2-208ENST00000583927 ADARB1P78563 741 aaKnown RBP8.11□□□□□ -1.11
SKA2-208ENST00000583927 IL18R1Q13478 541 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 ZNF146Q15072 292 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 RUSC1-AS1Q66K80 236 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 PARP16Q8N5Y8 322 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 C3orf56Q8N813 242 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 SETD9Q8NE22 299 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 TMEM185AQ8NFB2 350 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 TRMT10AQ8TBZ6 339 aaKnown RBP8.11□□□□□ -1.11
SKA2-208ENST00000583927 DYRK2Q92630 601 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 ZDHHC16Q969W1 377 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 FGGYQ96C11 551 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 ZNF488Q96MN9 340 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 OPALINQ96PE5 141 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 NEK6Q9HC98 313 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 AMBNQ9NP70 447 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 SOX21Q9Y651 276 aaPredicted RBP8.11□□□□□ -1.11
SKA2-208ENST00000583927 MGAM2Q2M2H8 2515 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 VWFP04275 2813 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 MDFIC2A0A1B0GVS7 189 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 hCG_1809904A0A1W2PP81 198 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 A0A1W2PPE2 198 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 A0A1W2PQ09 198 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 A0A1W2PR64 198 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 A0A1W2PRV1 198 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 H0YAE9 185 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 NPFFO15130 113 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 ZFPL1O95159 310 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 CYB5AP00167 134 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 TFF1P04155 84 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 FBP1P09467 338 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 ZNF20P17024 532 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 EEF1B2P24534 225 aaKnown RBP8.1□□□□□ -1.11
SKA2-208ENST00000583927 AZGP1P25311 298 aaKnown RBP8.1□□□□□ -1.11
SKA2-208ENST00000583927 GBX2P52951 348 aaPredicted RBP8.1□□□□□ -1.11
SKA2-208ENST00000583927 MTCP1P56278 107 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 MEF2CQ06413 473 aaPredicted RBP8.1□□□□□ -1.11
SKA2-208ENST00000583927 PDZK1IP1Q13113 114 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 MIDNQ504T8 468 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 SPIN3Q5JUX0 258 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 OGFRL1Q5TC84 451 aaPredicted RBP8.1□□□□□ -1.11
SKA2-208ENST00000583927 FIP1L1Q6UN15 594 aaKnown RBP8.1□□□□□ -1.11
SKA2-208ENST00000583927 SLC25A26Q70HW3 274 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 SERPINA12Q8IW75 414 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 SAXO1Q8IYX7 474 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 OR8H2Q8N162 312 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 C11orf42Q8N5U0 333 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 ZNF676Q8N7Q3 588 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 ZSCAN4Q8NAM6 433 aaPredicted RBP8.1□□□□□ -1.11
SKA2-208ENST00000583927 OR51A4Q8NGJ6 313 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 OR5D14Q8NGL3 314 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 SNX22Q96L94 193 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 DUX5Q96PT3 197 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 ZNF747Q9BV97 191 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 COMMD4Q9H0A8 199 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 SLITRK2Q9H156 845 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 DPAGT1Q9H3H5 408 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 ZCCHC4Q9H5U6 513 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 ISG20L2Q9H9L3 353 aaKnown RBP8.1□□□□□ -1.11
SKA2-208ENST00000583927 C19orf12Q9NSK7 152 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 ZNRD1Q9P1U0 126 aa8.1□□□□□ -1.11
SKA2-208ENST00000583927 SF3B6Q9Y3B4 125 aaKnown RBP8.1□□□□□ -1.11
SKA2-208ENST00000583927 A0A0U1RQK1 487 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 FAM181BA6NEQ2 426 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 F8VVB4 439 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 F8VWA3 439 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 NDUFA7O95182 113 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 LMO1P25800 156 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 CAPZA1P52907 286 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 COL10A1Q03692 680 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 RCN1Q15293 331 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 AANATQ16613 207 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 SMN1Q16637 294 aaKnown RBP8.09□□□□□ -1.11
SKA2-208ENST00000583927 TMEM200BQ69YZ2 307 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 HCP5Q6MZN7 132 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 ZNF529Q6P280 563 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 RPL22L1Q6P5R6 122 aaKnown RBP8.09□□□□□ -1.11
SKA2-208ENST00000583927 CRIP3Q6Q6R5 217 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 FAM58AQ8N1B3 248 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 DHRSXQ8N5I4 330 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 OR13C3Q8NGS6 347 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 OR10AC1Q8NH08 325 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 OR5AK2Q8NH90 309 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 SGMS2Q8NHU3 365 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 MEGF9Q9H1U4 602 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 DCLRE1BQ9H816 532 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 HEXA-AS1Q9H8Q6 139 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 SIRT7Q9NRC8 400 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 OR14J1Q9UGF5 321 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 DIMT1Q9UNQ2 313 aaKnown RBP8.09□□□□□ -1.11
SKA2-208ENST00000583927 EXOSC1Q9Y3B2 195 aaKnown RBP8.09□□□□□ -1.11
SKA2-208ENST00000583927 FAM96BQ9Y3D0 163 aa8.09□□□□□ -1.11
SKA2-208ENST00000583927 C17orf98A8MV24 154 aa8.08□□□□□ -1.12
SKA2-208ENST00000583927 E9PI62 339 aa8.08□□□□□ -1.12
SKA2-208ENST00000583927 H3BSH0 61 aa8.08□□□□□ -1.12
SKA2-208ENST00000583927 OGG1O15527 345 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms