RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 CACNG2Q9Y698 323 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 VPS13CQ709C8 3753 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 RAI1Q7Z5J4 1906 aaPredicted RBP10.7□□□□□ -0.7
SRSF1-204ENST00000581979 IGKV1-12A0A0C4DH73 117 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 SULT1C2O00338 296 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 SOCS1O15524 211 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 RBBP9O75884 186 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 IGKV1D-12P01611 117 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 GSTT2BP0CG30 244 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 GNB3P16520 340 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 PTAFRP25105 342 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 RFX2P48378 723 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 AP3S2P59780 193 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 CDNFQ49AH0 187 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 TMEM255AQ5JRV8 349 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 VHLLQ6RSH7 139 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 CCBE1Q6UXH8 406 aaPredicted RBP10.7□□□□□ -0.7
SRSF1-204ENST00000581979 ZNF573Q86YE8 665 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 MKXQ8IYA7 352 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 LRRC75A-AS1Q8N1F1 130 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 SLAMF9Q96A28 289 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 RAB3CQ96E17 227 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 TM2D1Q9BX74 207 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 KLK11Q9UBX7 282 aa10.7□□□□□ -0.7
SRSF1-204ENST00000581979 ROS1P08922 2347 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.69□□□□□ -0.7
SRSF1-204ENST00000581979 MEIS3P1A6NDR6 274 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 TMEM235A6NFC5 223 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 GABRR1P24046 479 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 GLRXP35754 106 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 RPS23P62266 143 aaKnown RBP10.69□□□□□ -0.7
SRSF1-204ENST00000581979 NKX6-1P78426 367 aaPredicted RBP10.69□□□□□ -0.7
SRSF1-204ENST00000581979 BEX5Q5H9J7 111 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 SHEQ5VZ18 495 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 HAGHLQ6PII5 290 aaPredicted RBP10.69□□□□□ -0.7
SRSF1-204ENST00000581979 DNM1P46Q6ZS02 220 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 SAXO1Q8IYX7 474 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 BATF2Q8N1L9 274 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 OSR2Q8N2R0 312 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 AQP3Q92482 292 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 NEDD4LQ96PU5 975 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 HEATR1Q9H583 2144 aaKnown RBP10.69□□□□□ -0.7
SRSF1-204ENST00000581979 SCPEP1Q9HB40 452 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 NGBQ9NPG2 151 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 NKIRAS2Q9NYR9 191 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 DUSP13Q9UII6 198 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 RBMX2Q9Y388 322 aaKnown RBP10.69□□□□□ -0.7
SRSF1-204ENST00000581979 ARID1AO14497 2285 aa10.69□□□□□ -0.7
SRSF1-204ENST00000581979 NIPBLQ6KC79 2804 aaeCLIP10.68□□□□□ -0.7
SRSF1-204ENST00000581979 FAM240BA0A1B0GVZ2 78 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-204ENST00000581979 H0YL77 283 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 TRAPPC2LH3BP13 241 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 H7C417 338 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 LPLP06858 475 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 SFTPBP07988 381 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 BLVRBP30043 206 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-204ENST00000581979 KLF9Q13886 244 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-204ENST00000581979 PCGF3Q3KNV8 242 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 PRR14LQ5THK1 2151 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 C20orf204Q6ZNR8 217 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 FAM89BQ8N5H3 189 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 GPX8Q8TED1 209 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 SEH1LQ96EE3 360 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 MRPS24Q96EL2 167 aaKnown RBP10.68□□□□□ -0.7
SRSF1-204ENST00000581979 Q96M66 194 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 C7orf50Q9BRJ6 194 aaKnown RBP10.68□□□□□ -0.7
SRSF1-204ENST00000581979 RBFOX1Q9NWB1 397 aaKnown RBP10.68□□□□□ -0.7
SRSF1-204ENST00000581979 MTFP1Q9UDX5 166 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 ELF5Q9UKW6 265 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-204ENST00000581979 DSCAMO60469 2012 aa10.68□□□□□ -0.7
SRSF1-204ENST00000581979 ANKRD20A5PA0PJZ0 165 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 DPRXA6NFQ7 191 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 ABCD4O14678 606 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 GSTP1P09211 210 aaKnown RBP10.67□□□□□ -0.7
SRSF1-204ENST00000581979 CSF1P09603 554 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 ZNF250P15622 560 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 HIST1H1DP16402 221 aaKnown RBP10.67□□□□□ -0.7
SRSF1-204ENST00000581979 BCL3P20749 454 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 GNG2P59768 71 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 ACTBP60709 375 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 ACTG1P63261 375 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 DYRK1AQ13627 763 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 KRTAP21-3Q3LHN1 58 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 PLAC9Q5JTB6 97 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 TRAPPC6BQ86SZ2 158 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 FBXL14Q8N1E6 418 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 IGFBPL1Q8WX77 278 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 ARHGAP5-AS1Q96IT6 56 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 TMEM204Q9BSN7 226 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 PKIBQ9C010 78 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 OR51I2Q9H344 312 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 UBTD1Q9HAC8 227 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 TAS2R8Q9NYW2 309 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 LRP5LA4QPB2 252 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 TMEM210A6NLX4 147 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 J3QT63 122 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 MLNRO43193 412 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 SYNGR1O43759 233 aa10.67□□□□□ -0.7
SRSF1-204ENST00000581979 MT-ND4P03905 459 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms