RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 C8orf4Q9NR00 106 aa15.98■□□□□ 0.15
SREBF1-220ENST00000581707 CAB39Q9Y376 341 aaPredicted RBP15.98■□□□□ 0.15
SREBF1-220ENST00000581707 A0A1W2PRD5 423 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 A0A1W2PRF3 423 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 A0A1W2PRM7 423 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 FAM181BA6NEQ2 426 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 E9PI62 339 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 NPFFO15130 113 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 CLIC3O95833 236 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 CYB5AP00167 134 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 CHRM2P08172 466 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 RPSAP08865 295 aaKnown RBP15.97■□□□□ 0.15
SREBF1-220ENST00000581707 OCM2P0CE71 109 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 OCMP0CE72 109 aaPredicted RBP15.97■□□□□ 0.15
SREBF1-220ENST00000581707 POU3F4P49335 361 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 UBE2E1P51965 193 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 GBX2P52951 348 aaPredicted RBP15.97■□□□□ 0.15
SREBF1-220ENST00000581707 COL10A1Q03692 680 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 ZNF691Q5VV52 312 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 TTC23Q5W5X9 447 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 TMEM200BQ69YZ2 307 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 LHFPL2Q6ZUX7 228 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 LDLRAD3Q86YD5 345 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 Q8IYB0 196 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 PACRGLQ8N7B6 248 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 OR5D13Q8NGL4 314 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 CYGBQ8WWM9 190 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 TAF15Q92804 592 aaKnown RBP eCLIP15.97■□□□□ 0.15
SREBF1-220ENST00000581707 SPSB1Q96BD6 273 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 CHIAQ9BZP6 476 aa15.97■□□□□ 0.15
SREBF1-220ENST00000581707 A0A1W2PPH5 198 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 TMEM212A6NML5 194 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 K7N7A8 449 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 ZFPL1O95159 310 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 CRYBA1P05813 215 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 CCDC159P0C7I6 412 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 LIMS3P0CW19 117 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 LIMS4P0CW20 117 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 FIP1L1Q6UN15 594 aaKnown RBP15.96■□□□□ 0.15
SREBF1-220ENST00000581707 PNKDQ8N490 385 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 ASCC1Q8N9N2 400 aaKnown RBP15.96■□□□□ 0.15
SREBF1-220ENST00000581707 OR5AK2Q8NH90 309 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 HAVCR2Q8TDQ0 301 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 EMG1Q92979 244 aaKnown RBP15.96■□□□□ 0.15
SREBF1-220ENST00000581707 OPALINQ96PE5 141 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 JAM3Q9BX67 310 aa15.96■□□□□ 0.15
SREBF1-220ENST00000581707 IGHV4-59P01825 116 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 MT-ND2P03891 347 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 FBP1P09467 338 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 PEX2P28328 305 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 IER3P46695 156 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 NPBWR2P48146 333 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 ACSM1Q08AH1 577 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 PDZK1IP1Q13113 114 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 DHRSXQ8N5I4 330 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 OR13C9Q8NGT0 318 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 CNIH3Q8TBE1 160 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 ZNF747Q9BV97 191 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 COMMD4Q9H0A8 199 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 DPAGT1Q9H3H5 408 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 ZCCHC4Q9H5U6 513 aa15.95■□□□□ 0.14
SREBF1-220ENST00000581707 SF3B6Q9Y3B4 125 aaKnown RBP15.95■□□□□ 0.14
SREBF1-220ENST00000581707 TRBV2A0A0J9YWF9 115 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 MEIOCA2RUB1 952 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 SPRY1O43609 319 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-220ENST00000581707 ANGPTL7O43827 346 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 ZNF737O75373 536 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 BCL3P20749 454 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 OMGP23515 440 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 DCKP27707 260 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 SAA4P35542 130 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 ETV1P50549 477 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 ADARB1P78563 741 aaKnown RBP15.94■□□□□ 0.14
SREBF1-220ENST00000581707 HCP5Q6MZN7 132 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 SERPINA12Q8IW75 414 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 FAM58AQ8N1B3 248 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 SETD9Q8NE22 299 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 OR5D14Q8NGL3 314 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 RFT1Q96AA3 541 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 SPACA5Q96QH8 159 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 PDCD1LG2Q9BQ51 273 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 SEBOXQ9HB31 216 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-220ENST00000581707 NEK6Q9HC98 313 aa15.94■□□□□ 0.14
SREBF1-220ENST00000581707 RBFOX1Q9NWB1 397 aaKnown RBP15.94■□□□□ 0.14
SREBF1-220ENST00000581707 hCG_1809904A0A1W2PP81 198 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 A0A1W2PPE2 198 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 A0A1W2PR64 198 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 A0A1W2PRV1 198 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 IRGMA1A4Y4 181 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 POM121CA8CG34 1229 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 ANKRD65E5RJM6 399 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 HAND1O96004 215 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 PAHP00439 452 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 PIPP12273 146 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-220ENST00000581707 GTF2A1P52655 376 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-220ENST00000581707 TMPRSS11AQ6ZMR5 421 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 GDPD3Q7L5L3 318 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 C11orf42Q8N5U0 333 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 DYRK2Q92630 601 aa15.93■□□□□ 0.14
SREBF1-220ENST00000581707 SNX22Q96L94 193 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms