RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ZNF695Q8IW36 515 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 OR8H2Q8N162 312 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 ABHD12Q8N2K0 398 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 CHPT1Q8WUD6 406 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 SNX22Q96L94 193 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 CDRT15Q96T59 188 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 OR51V1Q9H2C8 321 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 IL1RAPQ9NPH3 570 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 CMC2Q9NRP2 79 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 FGFR1OP2Q9NVK5 253 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 TAS2R1Q9NYW7 299 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 LINC00312Q9Y6C7 94 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 PQLC2LA1A4F0 135 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 ACOD1A6NK06 481 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 LEUTXA8MZ59 168 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 PSMD9O00233 223 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 TNFRSF11BO00300 401 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 SOX14O95416 240 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 MPZP25189 248 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 ERVK11-1P61568 191 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 BDH1Q02338 343 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 RTN4RL2Q86UN3 420 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 RNF148Q8N7C7 305 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 TPRX1Q8N7U7 411 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 OR5M8Q8NGP6 311 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 ZNF596Q8TC21 504 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 OR51E1Q8TCB6 317 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 RAX2Q96IS3 184 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 NOL4LQ96MY1 436 aaPredicted RBP10.06□□□□□ -0.8
SS18-219ENST00000581570 TEAD3Q99594 435 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 PBOV1Q9GZY1 135 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 GPR84Q9NQS5 396 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 GPR173Q9NS66 373 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 KLHDC2Q9Y2U9 406 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 MOB4Q9Y3A3 225 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 LYVE1Q9Y5Y7 322 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 HSPE1-MOB4S4R3N1 261 aa10.06□□□□□ -0.8
SS18-219ENST00000581570 TMEM269A0A1B0GVZ9 245 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 TMEM82A0PJX8 343 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 CCNB2O95067 398 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 SLC35B1P78383 322 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 CLVS2Q5SYC1 327 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 ZFAND6Q6FIF0 208 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 OR52W1Q6IF63 320 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 BAIAP2L2Q6UXY1 529 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 ANGPTL5Q86XS5 388 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 SBSPONQ8IVN8 264 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 COMMD1Q8N668 190 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 AQP11Q8NBQ7 271 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 SPAG4Q9NPE6 437 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 FAM206AQ9NX38 181 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 SCOCQ9UIL1 159 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 LINC00527Q9UJ94 153 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.05□□□□□ -0.8
SS18-219ENST00000581570 ZNF256Q9Y2P7 627 aaPredicted RBP10.05□□□□□ -0.8
SS18-219ENST00000581570 SMAD5-AS1Q9Y6J3 95 aa10.05□□□□□ -0.8
SS18-219ENST00000581570 ARRDC5A6NEK1 342 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 SERPINE3A8MV23 424 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 SEC14L6B5MCN3 397 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 DLGAP1O14490 977 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 DHRS3O75911 302 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 IGLV3-1P01715 115 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 FAM106CPP0CH98 169 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 PEX2P28328 305 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 CEACAM3P40198 252 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 MNDAP41218 407 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 IL24Q13007 206 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 GRK1Q15835 563 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 TRAPPC6BQ86SZ2 158 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 NSMCE2Q96MF7 247 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 PKIBQ9C010 78 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 MAGEL2Q9UJ55 1249 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 LAMP5Q9UJQ1 280 aa10.04□□□□□ -0.8
SS18-219ENST00000581570 LYSTQ99698 3801 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 F8VVB4 439 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 F8VWA3 439 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 TOR1AO14656 332 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 INMTO95050 263 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 LY86O95711 162 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 ALOX5APP20292 161 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 GABRR1P24046 479 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 ESRRGP62508 458 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 PPP1R8Q12972 351 aaKnown RBP10.03□□□□□ -0.8
SS18-219ENST00000581570 TPTE2P1Q5T6R2 138 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 PRAMEF5Q5TYX0 476 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 SLX4IPQ5VYV7 408 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 TMEM42Q69YG0 159 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 CCDC144NLQ6NUI1 221 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 IQCF1Q8N6M8 205 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 OR52N4Q8NGI2 321 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 TRMT10AQ8TBZ6 339 aaKnown RBP10.03□□□□□ -0.8
SS18-219ENST00000581570 CREB3L1Q96BA8 519 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 CHST6Q9GZX3 395 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 DCLRE1BQ9H816 532 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 DNAJB9Q9UBS3 223 aa10.03□□□□□ -0.8
SS18-219ENST00000581570 UBE2J1Q9Y385 318 aaPredicted RBP10.03□□□□□ -0.8
SS18-219ENST00000581570 STAB2Q8WWQ8 2551 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 FAM172BPA6NC97 362 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 A6NIN4 97 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms