RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 FAM189A2Q15884 450 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 MICBQ29980 383 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 CLEC12BQ2HXU8 276 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 C11orf91Q3C1V1 193 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 Q5PR19 223 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 STUMQ69YW2 141 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 AWAT2Q6E213 333 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 SFXN4Q6P4A7 337 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 ACP7Q6ZNF0 438 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 DCDC5Q6ZRR9 648 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 OR2W3Q7Z3T1 314 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 NR2C2APQ86WQ0 139 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 TGIF2LYQ8IUE0 185 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 SPICQ8N5J4 248 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 SLC25A28Q96A46 364 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 PTX4Q96A99 478 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 RFT1Q96AA3 541 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 NAA50Q9GZZ1 169 aaKnown RBP8.72□□□□□ -1.01
CCDC47-203ENST00000580986 CST11Q9H112 138 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 METTL9Q9H1A3 318 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 RNF167Q9H6Y7 350 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 IFT22Q9H7X7 185 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 HMG20AQ9NP66 347 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 BATF3Q9NR55 127 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 WIPI2Q9Y4P8 454 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 CSMD1Q96PZ7 3565 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 IGHV3-64DA0A0J9YX35 117 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A10PA6NDY2 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A18PA6NE21 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A16PA6NEW6 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A20PA6NIJ5 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A8PA6NJQ4 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A7PA6NKC0 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A22PA8MWA6 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A12PA8MX19 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A5PA8MXJ8 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A23PA8MXZ1 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 LYNX1G3V0Z9 82 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 H3BMQ9 156 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-203ENST00000580986 LDLRAD4O15165 306 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 PPIHO43447 177 aaKnown RBP8.71□□□□□ -1.02
CCDC47-203ENST00000580986 AKR7A2O43488 359 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 SPRY1O43609 319 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-203ENST00000580986 NXPH2O95156 264 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 CDRT1O95170 752 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 CSTBP04080 98 aaKnown RBP8.71□□□□□ -1.02
CCDC47-203ENST00000580986 SFTPBP07988 381 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A15PP0C7V4 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A13PP0C7W8 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A14PP0C7W9 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM90A24PP0C7X0 464 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 LYNX1P0DP58 116 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 CALCBP10092 127 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 GTF2F2P13984 249 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 ARSBP15848 533 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 EGR1P18146 543 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 OR10A3P58181 314 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 VBP1P61758 197 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 QRFPP83859 136 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 ZMYND11Q15326 602 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 RSU1Q15404 277 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 RAB11BQ15907 218 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 RNF144BQ7Z419 303 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 C1QL2Q7Z5L3 287 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM58AQ8N1B3 248 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 OR5D18Q8NGL1 313 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 ANGPTL6Q8NI99 470 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 KCNG3Q8TAE7 436 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 SLAMF9Q96A28 289 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 BPESC1Q9GZL8 116 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 FAM192AQ9GZU8 254 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 PLGRKTQ9HBL7 147 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 TMEM165Q9HC07 324 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 DCAF16Q9NXF7 216 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 NLKQ9UBE8 527 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 RSL24D1Q9UHA3 163 aaKnown RBP8.71□□□□□ -1.02
CCDC47-203ENST00000580986 ZNF222Q9UK12 451 aa8.71□□□□□ -1.02
CCDC47-203ENST00000580986 A0A096LNT2 108 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 OR2AT4A6NND4 320 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 TMEM14DPA8MWL7 114 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 F5H0A9 414 aaPredicted RBP8.7□□□□□ -1.02
CCDC47-203ENST00000580986 ANGPTL7O43827 346 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 PLATP00750 562 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 RAB6AP20340 208 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 BCL3P20749 454 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 LMO1P25800 156 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 RPS19P39019 145 aaKnown RBP8.7□□□□□ -1.02
CCDC47-203ENST00000580986 NPBWR2P48146 333 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 SERPINB10P48595 397 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 ART1P52961 327 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 RBM11P57052 281 aaKnown RBP8.7□□□□□ -1.02
CCDC47-203ENST00000580986 LSM3P62310 102 aaKnown RBP8.7□□□□□ -1.02
CCDC47-203ENST00000580986 MPV17LQ2QL34 196 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 GLIPR1L1Q6UWM5 242 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 OSR2Q8N2R0 312 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 CHST4Q8NCG5 386 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 ACOT12Q8WYK0 555 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 EMG1Q92979 244 aaKnown RBP8.7□□□□□ -1.02
CCDC47-203ENST00000580986 FAM3DQ96BQ1 224 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms