RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CRHBPP24387 322 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 TGM4P49221 684 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 KRTAP10-3P60369 221 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 CSNK2BP67870 215 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 SLC35A2P78381 396 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 IRF3Q14653 427 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 KCTD8Q6ZWB6 473 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 KRT74Q7RTS7 529 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 WDR86Q86TI4 376 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 BEND2Q8NDZ0 799 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 OR2T6Q8NHC8 308 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 ITPKCQ96DU7 683 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 PPA2Q9H2U2 334 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 EXOSC1Q9Y3B2 195 aaKnown RBP10.95□□□□□ -0.66
TRAF4-214ENST00000580073 SF3B6Q9Y3B4 125 aaKnown RBP10.95□□□□□ -0.66
TRAF4-214ENST00000580073 V9GYS6 101 aa10.95□□□□□ -0.66
TRAF4-214ENST00000580073 hCG_1809904A0A1W2PP81 198 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 A0A1W2PPE2 198 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 A0A1W2PR64 198 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 A0A1W2PRV1 198 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 CCDC159P0C7I6 412 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 NDUFB7P17568 137 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 ACTA2P62736 377 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 ACTG2P63267 376 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 ALKBH1Q13686 389 aaKnown RBP10.94□□□□□ -0.66
TRAF4-214ENST00000580073 AANATQ16613 207 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 ZNF788Q6ZQV5 615 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 FAM220AQ7Z4H9 259 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 ZDHHC23Q8IYP9 409 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 NANOGP1Q8N7R0 232 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 OR51A4Q8NGJ6 313 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 RPS4Y2Q8TD47 263 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 RGP1Q92546 391 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-214ENST00000580073 HIST1H2AAQ96QV6 131 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 MOB1AQ9H8S9 216 aa10.94□□□□□ -0.66
TRAF4-214ENST00000580073 A0A1B0GW55 424 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 IRGMA1A4Y4 181 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 ZNF850A8MQ14 1090 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 H3BUX3 64 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-214ENST00000580073 SIGLEC5O15389 551 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 FCN3O75636 299 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 CST4P01036 141 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 MT-ND2P03891 347 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 OPN1MWP04001 364 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 DUX4L2P0CJ85 424 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 DUX4L3P0CJ86 424 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 DUX4L4P0CJ87 422 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 DUX4L5P0CJ88 424 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 DUX4L6P0CJ89 424 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 DUX4L7P0CJ90 424 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 OPN1MW2P0DN77 364 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 OPN1MW3P0DN78 364 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 FAHP16930 419 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 GLRA1P23415 457 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 CCR9P51686 369 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 PRDX4Q13162 271 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 KLRD1Q13241 179 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 LRRC75BQ2VPJ9 315 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 DUX4L9Q6RFH8 374 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-214ENST00000580073 C1QL4Q86Z23 238 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 C11orf53Q8IXP5 236 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 STX19Q8N4C7 294 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 ZFP41Q8N8Y5 198 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 HPSE2Q8WWQ2 592 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 OR5M11Q96RB7 305 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 PDCD1LG2Q9BQ51 273 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 CDCA4Q9BXL8 241 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 NPFFR1Q9GZQ6 430 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 BABAM2Q9NXR7 383 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 NLKQ9UBE8 527 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 DUX4Q9UBX2 424 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 ZNF281Q9Y2X9 895 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 LSM2Q9Y333 95 aaKnown RBP10.93□□□□□ -0.66
TRAF4-214ENST00000580073 MAB21L2Q9Y586 359 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 DSCAML1Q8TD84 2053 aa10.93□□□□□ -0.66
TRAF4-214ENST00000580073 LOC107986453A0A1B0GWG9 222 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 OR2AT4A6NND4 320 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 OGG1O15527 345 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 ANGPTL7O43827 346 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 DHRS3O75911 302 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 ZFPL1O95159 310 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 ACAA1P09110 424 aaPredicted RBP10.92□□□□□ -0.66
TRAF4-214ENST00000580073 MAP2K3P46734 347 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 FBLN7Q53RD9 439 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 RNLSQ5VYX0 342 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 TMEM42Q69YG0 159 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 EGFL6Q8IUX8 553 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 Q8N7P7 452 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 OR4S1Q8NGB4 309 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 OR52N1Q8NH53 320 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 ANGPTL6Q8NI99 470 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 OR5P3Q8WZ94 311 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 PIGCQ92535 297 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 GAFA1Q96PS6 74 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 SSX3Q99909 188 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 SNTG1Q9NSN8 517 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 PIGLQ9Y2B2 252 aa10.92□□□□□ -0.66
TRAF4-214ENST00000580073 A0A1W2PRD5 423 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 A0A1W2PRF3 423 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms