RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 KPNA4O00629 521 aaPredicted RBP4.38□□□□□ -1.71
CCDC178-209ENST00000579947 SOCS2O14508 198 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 XRCC2O43543 280 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 IGHV3-11P01762 117 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 BMP2P12643 396 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 PEX2P28328 305 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 EDDM3BP56851 147 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 SYNJ2BPP57105 145 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 ALG10Q5BKT4 473 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 C6orf136Q5SQH8 315 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 PRAMEF5Q5TYX0 476 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 OTPQ5XKR4 325 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 ZNF767PQ75MW2 155 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 LRRC75AQ8NAA5 344 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 POC1AQ8NBT0 407 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 OR2T10Q8NGZ9 312 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 ZNF671Q8TAW3 534 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 ZNF799Q96GE5 643 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 RARRES2Q99969 163 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 SPATA5L1Q9BVQ7 753 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 FGF23Q9GZV9 251 aaPredicted RBP4.38□□□□□ -1.71
CCDC178-209ENST00000579947 PNRC2Q9NPJ4 139 aaKnown RBP4.38□□□□□ -1.71
CCDC178-209ENST00000579947 MEPEQ9NQ76 525 aaPredicted RBP4.38□□□□□ -1.71
CCDC178-209ENST00000579947 FAM212BQ9NTI7 297 aaPredicted RBP4.38□□□□□ -1.71
CCDC178-209ENST00000579947 PEMTQ9UBM1 199 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 POLR1DQ9Y2S0 133 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 DNAJC15Q9Y5T4 150 aa4.38□□□□□ -1.71
CCDC178-209ENST00000579947 NBDYA0A0U1RRE5 68 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 TMEM120BA0PK00 339 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 MEX3AA1L020 520 aaKnown RBP4.37□□□□□ -1.71
CCDC178-209ENST00000579947 PEX11AO75192 247 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 KHDRBS3O75525 346 aaKnown RBP4.37□□□□□ -1.71
CCDC178-209ENST00000579947 OR2A4O95047 310 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 HLA-DMBP28068 263 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 CRIP2P52943 208 aaPredicted RBP4.37□□□□□ -1.71
CCDC178-209ENST00000579947 TATDN3Q17R31 274 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 DEFB114Q30KQ6 69 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 Q6ZTC4 211 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 GDPD3Q7L5L3 318 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 LNX2Q8N448 690 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 TESCQ96BS2 214 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 RNF167Q9H6Y7 350 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 ZNF355PQ9NSJ1 428 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 JRKLQ9Y4A0 524 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 TMEM247A6NEH6 219 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 PRODHO43272 600 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 ZNF737O75373 536 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 FCGR2BP31994 310 aaPredicted RBP4.37□□□□□ -1.71
CCDC178-209ENST00000579947 FAM3AP98173 230 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 TAF13Q15543 124 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 PYHIN1Q6K0P9 492 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 HEPN1Q6WQI6 88 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 CSNK2A3Q8NEV1 391 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 ACTRT1Q8TDG2 376 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 SPTSSAQ969W0 71 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 ELAC2Q9BQ52 826 aaKnown RBP4.37□□□□□ -1.71
CCDC178-209ENST00000579947 SSU72Q9NP77 194 aaKnown RBP4.37□□□□□ -1.71
CCDC178-209ENST00000579947 PNPOQ9NVS9 261 aa4.37□□□□□ -1.71
CCDC178-209ENST00000579947 A0A0B4J203 849 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 H7C1C5 153 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 ATP6V0E1O15342 81 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 TROVE2P10155 538 aaKnown RBP eCLIP4.36□□□□□ -1.71
CCDC178-209ENST00000579947 NOS3P29474 1203 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 DNAJB13P59910 316 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 KRTAP10-1P60331 282 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 LCN6P62502 163 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 SLC18B1Q6NT16 456 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 DRAM2Q6UX65 266 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 OR6V1Q8N148 313 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 TCTEX1D1Q8N7M0 179 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 C15orf53Q8NAA6 179 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 FNDC5Q8NAU1 212 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 TWIST2Q8WVJ9 160 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 OR51I2Q9H344 312 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 TECRQ9NZ01 308 aaKnown RBP4.36□□□□□ -1.71
CCDC178-209ENST00000579947 FOXA2Q9Y261 457 aaPredicted RBP4.36□□□□□ -1.71
CCDC178-209ENST00000579947 COA3Q9Y2R0 106 aaPredicted RBP4.36□□□□□ -1.71
CCDC178-209ENST00000579947 RHBDD3Q9Y3P4 386 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 SOX15O60248 233 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 TPST1O60507 370 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 MT-ND1P03886 318 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 VIMP08670 466 aaKnown RBP4.36□□□□□ -1.71
CCDC178-209ENST00000579947 SERPINB9P50453 376 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 LRRC74AQ0VAA2 488 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 KPNB1Q14974 876 aaKnown RBP4.36□□□□□ -1.71
CCDC178-209ENST00000579947 GTDC1Q4AE62 458 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 OR8H2Q8N162 312 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 MCHR1Q99705 422 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 PAPOLGQ9BWT3 736 aaKnown RBP4.36□□□□□ -1.71
CCDC178-209ENST00000579947 GAL3ST2Q9H3Q3 398 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 IFT22Q9H7X7 185 aa4.36□□□□□ -1.71
CCDC178-209ENST00000579947 ALDOCP09972 364 aaKnown RBP4.35□□□□□ -1.71
CCDC178-209ENST00000579947 ZNF816Q0VGE8 651 aaPredicted RBP4.35□□□□□ -1.71
CCDC178-209ENST00000579947 PRDX4Q13162 271 aa4.35□□□□□ -1.71
CCDC178-209ENST00000579947 MAD2L1Q13257 205 aaPredicted RBP4.35□□□□□ -1.71
CCDC178-209ENST00000579947 RBM39Q14498 530 aaKnown RBP4.35□□□□□ -1.71
CCDC178-209ENST00000579947 DPY19L1Q2PZI1 675 aa4.35□□□□□ -1.71
CCDC178-209ENST00000579947 ANKRD55Q3KP44 614 aa4.35□□□□□ -1.71
CCDC178-209ENST00000579947 CORO6Q6QEF8 472 aa4.35□□□□□ -1.71
CCDC178-209ENST00000579947 SLC16A9Q7RTY1 509 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms