RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 FAM3DQ96BQ1 224 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 MRPS24Q96EL2 167 aaKnown RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 C1orf147Q96MC9 270 aaPredicted RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 SPACA5Q96QH8 159 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 OR2V2Q96R30 315 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 GPER1Q99527 375 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 DCUN1D5Q9BTE7 237 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 PLGRKTQ9HBL7 147 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 PTTG2Q9NZH5 202 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 SPATA2Q9UM82 520 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 ETV7Q9Y603 341 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 HEATR1Q9H583 2144 aaKnown RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 DOPEY2Q9Y3R5 2298 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 FBN2P35556 2912 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 SCO2A0A1W2PP80 73 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 TMEM14DPA8MWL7 114 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 J3QT63 122 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 IFNL4K9M1U5 179 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 LDLRAD4O15165 306 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 KDM4BO94953 1096 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 CYB5AP00167 134 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 GRPP07492 148 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 TMEM225BP0DP42 221 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 SLC2A2P11168 524 aaPredicted RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 BMXP51813 675 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 ERVK11-1P61568 191 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 MRPS11P82912 194 aaKnown RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 TNFAIP6P98066 277 aaPredicted RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 FAM189A2Q15884 450 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 IDNKQ5T6J7 187 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 HES5Q5TA89 166 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 ELP2Q6IA86 826 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 MZT2AQ6P582 158 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 HAGHLQ6PII5 290 aaPredicted RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 GLIPR1L1Q6UWM5 242 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 OR2W3Q7Z3T1 314 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 Q8IYB0 196 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 OR51D1Q8NGF3 324 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 OR10Z1Q8NGY1 313 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 OR51F2Q8NH61 342 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 KCNG3Q8TAE7 436 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 TNFAIP8L1Q8WVP5 186 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 NEU4Q8WWR8 484 aaPredicted RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 GTF3AQ92664 365 aaKnown RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 RAB1BQ9H0U4 201 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 FN3KRPQ9HA64 309 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 GCM1Q9NP62 436 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 DYNLRB1Q9NP97 96 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 MRPS28Q9Y2Q9 187 aaKnown RBP6.76□□□□□ -1.33
COPS3-215ENST00000578317 POLDIP2Q9Y2S7 368 aa6.76□□□□□ -1.33
COPS3-215ENST00000578317 ICE1Q9Y2F5 2266 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 HECTD1Q9ULT8 2610 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 IGKV1-12A0A0C4DH73 117 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 SMIM30A4D0T7 59 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 CDIPTO14735 213 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 CLPXO76031 633 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 FSTL3O95633 263 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 PAHP00439 452 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 LHBP01229 141 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 IGKV1D-12P01611 117 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 PGA5P0DJD9 388 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 OR3A4PP47883 348 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 MPPED2Q15777 294 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 NHLRC3Q5JS37 347 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 AWAT2Q6E213 333 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 WDR82Q6UXN9 313 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 SLC25A26Q70HW3 274 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 ZCCHC24Q8N2G6 241 aaKnown RBP6.75□□□□□ -1.33
COPS3-215ENST00000578317 MCFD2Q8NI22 146 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 DVL3Q92997 716 aaPredicted RBP6.75□□□□□ -1.33
COPS3-215ENST00000578317 RFT1Q96AA3 541 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 S100A13Q99584 98 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 CST11Q9H112 138 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 METTL9Q9H1A3 318 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 ABCG5Q9H222 651 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 UBTD1Q9HAC8 227 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 SEBOXQ9HB31 216 aaPredicted RBP6.75□□□□□ -1.33
COPS3-215ENST00000578317 DECR2Q9NUI1 292 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 RASL12Q9NYN1 266 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 MTCH1Q9NZJ7 389 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 OR5V1Q9UGF6 321 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 RAB22AQ9UL26 194 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 LAMP3Q9UQV4 416 aa6.75□□□□□ -1.33
COPS3-215ENST00000578317 ASH1LQ9NR48 2969 aaKnown RBP6.74□□□□□ -1.33
COPS3-215ENST00000578317 A0A0A6YYJ9 748 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 CTDSP2O14595 271 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 AKR7A2O43488 359 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 SYNGR1O43759 233 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 TPPPO94811 219 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 APOA1P02647 267 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 SFTPBP07988 381 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 GTF2F2P13984 249 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 PAX1P15863 534 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 PMELP40967 661 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 POU3F4P49335 361 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 CLDN12P56749 244 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 CCL8P80075 99 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 FAM90A1Q86YD7 464 aa6.74□□□□□ -1.33
COPS3-215ENST00000578317 FAM89BQ8N5H3 189 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms