RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 VHLP40337 213 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 NPBWR2P48146 333 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 SOX2P48431 317 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 YIF1BQ5BJH7 314 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 Q8IYB0 196 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 ZFP41Q8N8Y5 198 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 SGCDQ92629 289 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 TMEM106AQ96A25 262 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 WDFY2Q96P53 400 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 SPACA5Q96QH8 159 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 MDFIQ99750 246 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 OCEL1Q9H607 264 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 SEBOXQ9HB31 216 aaPredicted RBP15.95■□□□□ 0.14
SS18-208ENST00000577751 RAB26Q9ULW5 256 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 TPRKBQ9Y3C4 175 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 A0A0A6YYJ9 748 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 SPRY1O43609 319 aaPredicted RBP15.94■□□□□ 0.14
SS18-208ENST00000577751 CYB5AP00167 134 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 IGHV4-38-2P0DP08 117 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 POU3F4P49335 361 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 CEBPDP49716 269 aaPredicted RBP15.94■□□□□ 0.14
SS18-208ENST00000577751 ACSM1Q08AH1 577 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 IRF3Q14653 427 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 KISS1Q15726 138 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 USP43Q70EL4 1123 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 OR13C5Q8NGS8 318 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 RFT1Q96AA3 541 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 TBX15Q96SF7 602 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 ZNF69Q9UC07 566 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 KPTNQ9Y664 436 aa15.94■□□□□ 0.14
SS18-208ENST00000577751 FBN1P35555 2871 aaKnown RBP15.93■□□□□ 0.14
SS18-208ENST00000577751 IGKV1-12A0A0C4DH73 117 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 TOX4O94842 621 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 INMTO95050 263 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 IGKV1D-12P01611 117 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 SFTPBP07988 381 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 NDUFB7P17568 137 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 RAB3AP20336 220 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 BCL3P20749 454 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 CRHBPP24387 322 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 FPR2P25090 351 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 ZP1P60852 638 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 ARF6P62330 175 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 BDH1Q02338 343 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 C9orf139Q6ZV77 190 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 SAXO1Q8IYX7 474 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 ZSCAN4Q8NAM6 433 aaPredicted RBP15.93■□□□□ 0.14
SS18-208ENST00000577751 TMEM185AQ8NFB2 350 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 OR51A2Q8NGJ7 313 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 H1FXQ92522 213 aaKnown RBP15.93■□□□□ 0.14
SS18-208ENST00000577751 PCGF1Q9BSM1 259 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 MND1Q9BWT6 205 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 RHOFQ9HBH0 211 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 RBFOX1Q9NWB1 397 aaKnown RBP15.93■□□□□ 0.14
SS18-208ENST00000577751 TAS2R4Q9NYW5 299 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 OR14J1Q9UGF5 321 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 LSM2Q9Y333 95 aaKnown RBP15.93■□□□□ 0.14
SS18-208ENST00000577751 ATRQ13535 2644 aa15.93■□□□□ 0.14
SS18-208ENST00000577751 TRAV40A0A0B4J280 105 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 ANGPTL7O43827 346 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 GPX5O75715 221 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 KDM4BO94953 1096 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 ALDOBP05062 364 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 CHRM2P08172 466 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 HCKP08631 526 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 CELP19835 753 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 SRSF2Q01130 221 aaKnown RBP15.92■□□□□ 0.14
SS18-208ENST00000577751 Q499Y3 187 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 METTL11BQ5VVY1 283 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 FAM58AQ8N1B3 248 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 KIR3DL3Q8N743 410 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 ZNF418Q8TF45 676 aaPredicted RBP15.92■□□□□ 0.14
SS18-208ENST00000577751 C22orf15Q8WYQ4 148 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 EMG1Q92979 244 aaKnown RBP15.92■□□□□ 0.14
SS18-208ENST00000577751 CNBD2Q96M20 576 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 SLC6A7Q99884 636 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 FAM234AQ9H0X4 552 aa15.92■□□□□ 0.14
SS18-208ENST00000577751 ELL3Q9HB65 397 aaPredicted RBP15.92■□□□□ 0.14
SS18-208ENST00000577751 RRP15Q9Y3B9 282 aaKnown RBP15.92■□□□□ 0.14
SS18-208ENST00000577751 TRBV23-1A0A0A0MS06 115 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 PNMA8CA0A1B0GUJ8 204 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 K7N7A8 449 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 ZNF737O75373 536 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 VENTXO95231 258 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 TK1P04183 234 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 IGFBP3P17936 291 aaPredicted RBP15.91■□□□□ 0.14
SS18-208ENST00000577751 COL10A1Q03692 680 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 ZNF146Q15072 292 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 PDCD1Q15116 288 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 SPHARQ15513 63 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 BCL6BQ8N143 479 aaPredicted RBP15.91■□□□□ 0.14
SS18-208ENST00000577751 BPIFB2Q8N4F0 458 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 Q8N7P7 452 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 OR5D18Q8NGL1 313 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 OR5M11Q96RB7 305 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 SUCNR1Q9BXA5 334 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 HMG20AQ9NP66 347 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 IL36RNQ9UBH0 155 aa15.91■□□□□ 0.14
SS18-208ENST00000577751 IGHV3OR16-10A0A075B7F0 116 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 TRBV5-7A0A0A0MS05 114 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms