RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 MED21Q13503 144 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 CDK5R1Q15078 307 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 OR2G6Q5TZ20 316 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 Q8N7P7 452 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 ZNF485Q8NCK3 441 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 TMEM185AQ8NFB2 350 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 OR52N1Q8NH53 320 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 GATAD2BQ8WXI9 593 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 H1FXQ92522 213 aaKnown RBP11.49□□□□□ -0.57
GGA3-203ENST00000577435 OPALINQ96PE5 141 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 RHOFQ9HBH0 211 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 NEK6Q9HC98 313 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 PSORS1C1Q9UIG5 152 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 SOX21Q9Y651 276 aaPredicted RBP11.49□□□□□ -0.57
GGA3-203ENST00000577435 IGHV1-69DA0A0B4J2H0 117 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 K7N7A8 449 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 CYB5AP00167 134 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 IGHV1-69P01742 117 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 CHRM2P08172 466 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 BAMBIQ13145 260 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 XAF1Q6GPH4 301 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 ZNF529Q6P280 563 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 CRIP3Q6Q6R5 217 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 BRD3OSQ6XYD6 125 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 VMO1Q7Z5L0 202 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 SAXO1Q8IYX7 474 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 TBC1D15Q8TC07 691 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 NRG4Q8WWG1 115 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 TNFRSF14Q92956 283 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 SLAMF9Q96A28 289 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 C1orf147Q96MC9 270 aaPredicted RBP11.48□□□□□ -0.57
GGA3-203ENST00000577435 NOX4Q9NPH5 578 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 CHCHD3Q9NX63 227 aaKnown RBP11.48□□□□□ -0.57
GGA3-203ENST00000577435 ONECUT1Q9UBC0 465 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 CLEC2DQ9UHP7 191 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 DHDHQ9UQ10 334 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 TENM1Q9UKZ4 2725 aa11.48□□□□□ -0.57
GGA3-203ENST00000577435 TMEM89A2RUT3 159 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 SULT1B1O43704 296 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 ZNF737O75373 536 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 TK1P04183 234 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 COMPP49747 757 aaPredicted RBP11.47□□□□□ -0.57
GGA3-203ENST00000577435 CAPZA1P52907 286 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 GUCA2AQ02747 115 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 BLMHQ13867 455 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 ZNF146Q15072 292 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 DEFB112Q30KQ8 113 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 FAM58AQ8N1B3 248 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 OR13C9Q8NGT0 318 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 GPR148Q8TDV2 347 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 RGP1Q92546 391 aaPredicted RBP11.47□□□□□ -0.57
GGA3-203ENST00000577435 LHX4Q969G2 390 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 SMIM19Q96E16 107 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 METTL8Q9H825 291 aaKnown RBP11.47□□□□□ -0.57
GGA3-203ENST00000577435 ELL3Q9HB65 397 aaPredicted RBP11.47□□□□□ -0.57
GGA3-203ENST00000577435 FKBP14Q9NWM8 211 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 OR14J1Q9UGF5 321 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 ZNF281Q9Y2X9 895 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 SIRT4Q9Y6E7 314 aaPredicted RBP11.47□□□□□ -0.57
GGA3-203ENST00000577435 KIAA2026Q5HYC2 2103 aa11.47□□□□□ -0.57
GGA3-203ENST00000577435 A0A1W2PQ09 198 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 DNAJC9-AS1A6NH13 148 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 SPRY1O43609 319 aaPredicted RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 XPNPEP2O43895 674 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 KDM4BO94953 1096 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 LALBAP00709 142 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 RNASE1P07998 156 aaKnown RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 OCM2P0CE71 109 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 OCMP0CE72 109 aaPredicted RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 NPBWR2P48146 333 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 POU3F4P49335 361 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 CEBPDP49716 269 aaPredicted RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 RPL31P62899 125 aaKnown RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 COL10A1Q03692 680 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 SLC9A3R2Q15599 337 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 RNLSQ5VYX0 342 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 RUSC1-AS1Q66K80 236 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 DMKNQ6E0U4 476 aaPredicted RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 FIP1L1Q6UN15 594 aaKnown RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 Q6YL49 198 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 BATF2Q8N1L9 274 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 ZSCAN4Q8NAM6 433 aaPredicted RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 OR5D13Q8NGL4 314 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 TSEN15Q8WW01 171 aaKnown RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 EMG1Q92979 244 aaKnown RBP11.46□□□□□ -0.57
GGA3-203ENST00000577435 SNX22Q96L94 193 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 HMG20AQ9NP66 347 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 C19orf12Q9NSK7 152 aa11.46□□□□□ -0.57
GGA3-203ENST00000577435 IGKV1-12A0A0C4DH73 117 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 A0A1W2PPH5 198 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 ERICH4A6NGS2 130 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 RNASEK-C17orf49H0YIS7 233 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 IGKV1D-12P01611 117 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 ALDOBP05062 364 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 CD1AP06126 327 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 CD2P06729 351 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 RAB3AP20336 220 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 BCL3P20749 454 aa11.45□□□□□ -0.58
GGA3-203ENST00000577435 C21orf33P30042 268 aaPredicted RBP11.45□□□□□ -0.58
GGA3-203ENST00000577435 UBE2E1P51965 193 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms