RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 CALCBP10092 127 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 IRF2P14316 349 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 RPS2P15880 293 aaKnown RBP7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 ATF1P18846 271 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 NPBWR2P48146 333 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 ERVK11-1P61568 191 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 SNCBQ16143 134 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 FAM166AQ6J272 317 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 DCDC5Q6ZRR9 648 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 UTS2BQ765I0 119 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 C1orf87Q8N0U7 546 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 SPICQ8N5J4 248 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 PARP16Q8N5Y8 322 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 POC1AQ8NBT0 407 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 OR10Z1Q8NGY1 313 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 ANGPTL6Q8NI99 470 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 PP6455Q8WZ26 134 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 SLAMF9Q96A28 289 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 TMEM186Q96B77 213 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 MRPL48Q96GC5 212 aaKnown RBP7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 HIST1H2AAQ96QV6 131 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 NRIP2Q9BQI9 281 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 PPIL3Q9H2H8 161 aaKnown RBP7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 ZMAT4Q9H898 229 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 ABCB9Q9NP78 766 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 TRIM36Q9NQ86 728 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 SCN3BQ9NY72 215 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 TAS2R4Q9NYW5 299 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 OPN4Q9UHM6 478 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 ZNF222Q9UK12 451 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 MALRD1Q5VYJ5 2156 aa7.85□□□□□ -1.15
NPLOC4-219ENST00000576713 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.84□□□□□ -1.157e-20■■■■□ 19.6
NPLOC4-219ENST00000576713 hCG_2014768A0A024R1R8 64 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 A0A1W2PPK0 400 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 A8MXK9 166 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 MYL12BO14950 172 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 ADAM20O43506 726 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 SPRY1O43609 319 aaPredicted RBP7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 RGS10O43665 173 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 ANGPTL7O43827 346 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 PSG2P11465 335 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 ZNF20P17024 532 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 CELP19835 753 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 DVL1P1P54792 670 aaPredicted RBP7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 MZT1Q08AG7 82 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 ACSM1Q08AH1 577 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 MRPL28Q13084 256 aaKnown RBP7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 SPHARQ15513 63 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 DGUOKQ16854 277 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 RBM48Q5RL73 367 aaKnown RBP7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 FAM120AOSQ5T036 256 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 FAM27D1Q5T7N8 215 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 WDR25Q64LD2 544 aaPredicted RBP7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 C1QL2Q7Z5L3 287 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 PRIMA1Q86XR5 153 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 MUC20Q8N307 709 aaPredicted RBP7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 CD177Q8N6Q3 437 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 CCDC54Q8NEL0 328 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 OR5D18Q8NGL1 313 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 OR51F2Q8NH61 342 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 TSEN15Q8WW01 171 aaKnown RBP7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 MYDGFQ969H8 173 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 ITFG2Q969R8 447 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 TMEM106AQ96A25 262 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 C10orf35Q96D05 121 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 RAB39BQ96DA2 213 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 NEIL1Q96FI4 390 aaPredicted RBP7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 CYYR1Q96J86 154 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 OPALINQ96PE5 141 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 GAFA1Q96PS6 74 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 OR14A2Q96R54 314 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 MND1Q9BWT6 205 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 COMMD4Q9H0A8 199 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 ZCCHC4Q9H5U6 513 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 HES4Q9HCC6 221 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 CHCHD3Q9NX63 227 aaKnown RBP7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 DHDHQ9UQ10 334 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 TPRKBQ9Y3C4 175 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 HIVEP2P31629 2446 aa7.84□□□□□ -1.15
NPLOC4-219ENST00000576713 ARHGAP32A7KAX9 2087 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 TRBV5-7A0A0A0MS05 114 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 DVL1O14640 695 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 NOS1APO75052 506 aaPredicted RBP7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 CRLF1O75462 422 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 GATBO75879 557 aaKnown RBP7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 OCM2P0CE71 109 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 ZNF12P17014 697 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 IGFBP3P17936 291 aaPredicted RBP7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 ADRA2CP18825 462 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 BCL3P20749 454 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 GLRA1P23415 457 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 PITPNBP48739 271 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 FUT6P51993 359 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 LINC00310P59036 64 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 ZP1P60852 638 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 IL24Q13007 206 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 MED22Q15528 200 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 ACP7Q6ZNF0 438 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 ZNF788Q6ZQV5 615 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 SLC25A26Q70HW3 274 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms