RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TBX15Q96SF7 602 aa19.39■□□□□ 0.69
SNF8-217ENST00000576353 C19orf24Q9BVV8 132 aa19.39■□□□□ 0.69
SNF8-217ENST00000576353 ONECUT1Q9UBC0 465 aa19.39■□□□□ 0.69
SNF8-217ENST00000576353 OR14J1Q9UGF5 321 aa19.39■□□□□ 0.69
SNF8-217ENST00000576353 TRBV23-1A0A0A0MS06 115 aa19.38■□□□□ 0.69
SNF8-217ENST00000576353 TRIM77I1YAP6 450 aa19.38■□□□□ 0.69
SNF8-217ENST00000576353 OGG1O15527 345 aa19.38■□□□□ 0.69
SNF8-217ENST00000576353 POU3F4P49335 361 aa19.38■□□□□ 0.69
SNF8-217ENST00000576353 XAF1Q6GPH4 301 aa19.38■□□□□ 0.69
SNF8-217ENST00000576353 AHSA2Q719I0 299 aa19.38■□□□□ 0.69
SNF8-217ENST00000576353 RPS4Y2Q8TD47 263 aa19.38■□□□□ 0.69
SNF8-217ENST00000576353 SULT1B1O43704 296 aa19.37■□□□□ 0.69
SNF8-217ENST00000576353 INMTO95050 263 aa19.37■□□□□ 0.69
SNF8-217ENST00000576353 CD2P06729 351 aa19.37■□□□□ 0.69
SNF8-217ENST00000576353 PDZK1IP1Q13113 114 aa19.37■□□□□ 0.69
SNF8-217ENST00000576353 FIP1L1Q6UN15 594 aaKnown RBP19.37■□□□□ 0.69
SNF8-217ENST00000576353 SIGLECL1Q8N7X8 197 aa19.37■□□□□ 0.69
SNF8-217ENST00000576353 SMIM19Q96E16 107 aa19.37■□□□□ 0.69
SNF8-217ENST00000576353 A0A1W2PQ09 198 aa19.36■□□□□ 0.69
SNF8-217ENST00000576353 F8VVB4 439 aa19.36■□□□□ 0.69
SNF8-217ENST00000576353 F8VWA3 439 aa19.36■□□□□ 0.69
SNF8-217ENST00000576353 CHRM2P08172 466 aa19.36■□□□□ 0.69
SNF8-217ENST00000576353 CEBPDP49716 269 aaPredicted RBP19.36■□□□□ 0.69
SNF8-217ENST00000576353 C1orf122Q6ZSJ8 110 aa19.36■□□□□ 0.69
SNF8-217ENST00000576353 RGP1Q92546 391 aaPredicted RBP19.36■□□□□ 0.69
SNF8-217ENST00000576353 EMG1Q92979 244 aaKnown RBP19.36■□□□□ 0.69
SNF8-217ENST00000576353 FAM234AQ9H0X4 552 aa19.36■□□□□ 0.69
SNF8-217ENST00000576353 ZNF281Q9Y2X9 895 aa19.36■□□□□ 0.69
SNF8-217ENST00000576353 SIRT4Q9Y6E7 314 aaPredicted RBP19.36■□□□□ 0.69
SNF8-217ENST00000576353 CENPVL3A0A0U1RRI6 287 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 HCKP08631 526 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 RAB3AP20336 220 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 C21orf33P30042 268 aaPredicted RBP19.35■□□□□ 0.69
SNF8-217ENST00000576353 SOX2P48431 317 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 TAS2R43P59537 309 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 BLMHQ13867 455 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 C6orf141Q5SZD1 244 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 BRD3OSQ6XYD6 125 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 VMO1Q7Z5L0 202 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 ZNF485Q8NCK3 441 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 TBC1D15Q8TC07 691 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 LHX4Q969G2 390 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 CPNE2Q96FN4 548 aaPredicted RBP19.35■□□□□ 0.69
SNF8-217ENST00000576353 SEBOXQ9HB31 216 aaPredicted RBP19.35■□□□□ 0.69
SNF8-217ENST00000576353 ELL3Q9HB65 397 aaPredicted RBP19.35■□□□□ 0.69
SNF8-217ENST00000576353 FKBP14Q9NWM8 211 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 SCN3BQ9NY72 215 aa19.35■□□□□ 0.69
SNF8-217ENST00000576353 M0R1W7 72 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 MYL12BO14950 172 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 MAGEB3O15480 346 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 SPRY1O43609 319 aaPredicted RBP19.34■□□□□ 0.69
SNF8-217ENST00000576353 LALBAP00709 142 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 TK1P04183 234 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 DMKNQ6E0U4 476 aaPredicted RBP19.34■□□□□ 0.69
SNF8-217ENST00000576353 SAXO1Q8IYX7 474 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 FAM58AQ8N1B3 248 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 GHSRQ92847 366 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 RFT1Q96AA3 541 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 SPACA5Q96QH8 159 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 RHOFQ9HBH0 211 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 GLS2Q9UI32 602 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 ERGIC3Q9Y282 383 aa19.34■□□□□ 0.69
SNF8-217ENST00000576353 IGHV1-69DA0A0B4J2H0 117 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 A0A1W2PPH5 198 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 K7N7A8 449 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 IGHV1-69P01742 117 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 BCL3P20749 454 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 NPBWR2P48146 333 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 HSPA13P48723 471 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 COL10A1Q03692 680 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 BAMBIQ13145 260 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 KISS1Q15726 138 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 ZNF529Q6P280 563 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 FAM185AQ8N0U4 392 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 ZDHHC22Q8N966 263 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 ASCC1Q8N9N2 400 aaKnown RBP19.33■□□□□ 0.68
SNF8-217ENST00000576353 ZSCAN4Q8NAM6 433 aaPredicted RBP19.33■□□□□ 0.68
SNF8-217ENST00000576353 FAM216AQ8WUB2 273 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 MYDGFQ969H8 173 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 TMEM106AQ96A25 262 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 ZNF48Q96MX3 618 aaPredicted RBP19.33■□□□□ 0.68
SNF8-217ENST00000576353 ESM1Q9NQ30 184 aa19.33■□□□□ 0.68
SNF8-217ENST00000576353 RBFOX1Q9NWB1 397 aaKnown RBP19.33■□□□□ 0.68
SNF8-217ENST00000576353 PTGES3LE9PB15 166 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 ANGPTL7O43827 346 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 WNT4P56705 351 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 RPL31P62899 125 aaKnown RBP19.32■□□□□ 0.68
SNF8-217ENST00000576353 RIPK1Q13546 671 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 YIF1BQ5BJH7 314 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 SPIN3Q5JUX0 258 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 METAP1DQ6UB28 335 aaPredicted RBP19.32■□□□□ 0.68
SNF8-217ENST00000576353 Q8N7P7 452 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 NANOGP1Q8N7R0 232 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 OR5D18Q8NGL1 313 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 OR5D13Q8NGL4 314 aa19.32■□□□□ 0.68
SNF8-217ENST00000576353 METTL8Q9H825 291 aaKnown RBP19.32■□□□□ 0.68
SNF8-217ENST00000576353 ZMAT3Q9HA38 289 aaKnown RBP19.32■□□□□ 0.68
SNF8-217ENST00000576353 KDM4BO94953 1096 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 HAND1O96004 215 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 CDK1P06493 297 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms