RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 OR4Q3Q8NH05 313 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 TEX47Q8TBZ9 253 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 OR51E1Q8TCB6 317 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 P2RX4Q99571 388 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 DGCR6LQ9BY27 220 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 MROQ9BYG7 248 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 PKIBQ9C010 78 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 PBOV1Q9GZY1 135 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 OR51V1Q9H2C8 321 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 PALMDQ9NP74 551 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 GPR84Q9NQS5 396 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 ARMC1Q9NVT9 282 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 LAMP5Q9UJQ1 280 aa7.15□□□□□ -1.26
SMG6-218ENST00000575454 PQLC2LA1A4F0 135 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 FAM183AA6NL82 134 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 OOSP1A8MZH6 123 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 PRR23D1E9PI22 279 aaPredicted RBP7.14□□□□□ -1.27
SMG6-218ENST00000575454 PRODHO43272 600 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 ZNF254O75437 659 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 SOX14O95416 240 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 PRR23D2P0DMB1 279 aaPredicted RBP7.14□□□□□ -1.27
SMG6-218ENST00000575454 ALOX5APP20292 161 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 OR3A4PP47883 348 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 IL24Q13007 206 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 MICAQ29983 383 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 DMRTC1Q5HYR2 192 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 SLC35D3Q5M8T2 416 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 C9orf66Q5T8R8 295 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 TMEM42Q69YG0 159 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 CGB2Q6NT52 195 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 C10orf99Q6UWK7 81 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 CD300LDQ6UXZ3 194 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 C8orf86Q6ZUL3 223 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 ASRGL1Q7L266 308 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 HDXQ7Z353 690 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 ZNF695Q8IW36 515 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 ENTHD1Q8IYW4 607 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 RNF148Q8N7C7 305 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 OR5M8Q8NGP6 311 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 BCAS4Q8TDM0 211 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 GAL3ST2Q9H3Q3 398 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 MED20Q9H944 212 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 SEBOXQ9HB31 216 aaPredicted RBP7.14□□□□□ -1.27
SMG6-218ENST00000575454 PCDHB16Q9NRJ7 776 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 FAM206AQ9NX38 181 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 UBE2J1Q9Y385 318 aaPredicted RBP7.14□□□□□ -1.27
SMG6-218ENST00000575454 MOB4Q9Y3A3 225 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 HSPE1-MOB4S4R3N1 261 aa7.14□□□□□ -1.27
SMG6-218ENST00000575454 LCE6AA0A183 80 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 FUOMA2VDF0 154 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 ARRDC5A6NEK1 342 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 DHRS7CA6NNS2 312 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 SERPINE3A8MV23 424 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 H3BN98 237 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 TOR1AO14656 332 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 SELENOFO60613 162 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 IGLV3-1P01715 115 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 AMY1AP04745 511 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 AMY2AP04746 511 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 HMGN1P05114 100 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 HSD17B1P14061 328 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 CD24P25063 80 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 ERP29P30040 261 aaKnown RBP7.13□□□□□ -1.27
SMG6-218ENST00000575454 PRRX1P54821 245 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 ACTR3P61158 418 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 ESRRGP62508 458 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 GK3PQ14409 553 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 EDDM3AQ14507 147 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 GRK1Q15835 563 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 SPATS1Q496A3 300 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 TRAPPC6BQ86SZ2 158 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 ZNF329Q86UD4 541 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 THNSL2Q86YJ6 484 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 Q8IYB0 196 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 KLHL30-AS1Q8NEE0 82 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 OR8U1Q8NH10 309 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 ASB17Q8WXJ9 295 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 CEP19Q96LK0 163 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 CDRT15Q96T59 188 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 TEAD3Q99594 435 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 ASCL2Q99929 193 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 TEX12Q9BXU0 123 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 GON7Q9BXV9 100 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 YIPF3Q9GZM5 350 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 MOB1AQ9H8S9 216 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 NUFIP1Q9UHK0 495 aaKnown RBP7.13□□□□□ -1.27
SMG6-218ENST00000575454 HHLA2Q9UM44 414 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 SLC7A11Q9UPY5 501 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 SIRT4Q9Y6E7 314 aaPredicted RBP7.13□□□□□ -1.27
SMG6-218ENST00000575454 TMEM14AQ9Y6G1 99 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 HERC2O95714 4834 aa7.13□□□□□ -1.27
SMG6-218ENST00000575454 TRGV10A0A0A0MS01 117 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 TMEM82A0PJX8 343 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 MEX3AA1L020 520 aaKnown RBP7.12□□□□□ -1.27
SMG6-218ENST00000575454 CCL24O00175 119 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 MGST3O14880 152 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 ARPC2O15144 300 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 GABRR1P24046 479 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 CD34P28906 385 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 PRDX6P30041 224 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms