RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PCGF3Q3KNV8 242 aa20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 OSR2Q8N2R0 312 aa20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 RAB40AQ8WXH6 277 aa20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 S100A16Q96FQ6 103 aaKnown RBP20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 NRIP2Q9BQI9 281 aa20.3■□□□□ 0.84
ATPAF1-213ENST00000574428 CDK2P24941 298 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 PTBP1P26599 531 aaKnown RBP eCLIP20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 TALDO1P37837 337 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 SNU13P55769 128 aaKnown RBP20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 IL18Q14116 193 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 PIGYQ3MUY2 71 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 CDH24Q86UP0 819 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 PLEKHF2Q9H8W4 249 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 IL36RNQ9UBH0 155 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 GCN1Q92616 2671 aaKnown RBP20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 A0A0A6YYD4 124 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 CSF3P09919 207 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 TNFRSF1AP19438 455 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 DEFA1P59665 94 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 DEFA3P59666 94 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 MOGAT2Q3SYC2 334 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 ELP2Q6IA86 826 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 TGIF2LYQ8IUE0 185 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 POC1AQ8NBT0 407 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 OR51T1Q8NGJ9 327 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 LRRC29Q8WV35 223 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 PSMG3-AS1Q96PY0 264 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 CACNG6Q9BXT2 260 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 PCDHB16Q9NRJ7 776 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 TBC1D24Q9ULP9 559 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 PPP1R3CQ9UQK1 317 aa20.29■□□□□ 0.84
ATPAF1-213ENST00000574428 WNT9BO14905 357 aa20.28■□□□□ 0.84
ATPAF1-213ENST00000574428 PRKACAP17612 351 aa20.28■□□□□ 0.84
ATPAF1-213ENST00000574428 VEGFCP49767 419 aa20.28■□□□□ 0.84
ATPAF1-213ENST00000574428 ERVK11-1P61568 191 aa20.28■□□□□ 0.84
ATPAF1-213ENST00000574428 ZNF295-AS1Q8N0V1 137 aa20.28■□□□□ 0.84
ATPAF1-213ENST00000574428 Q8NFD4 153 aa20.28■□□□□ 0.84
ATPAF1-213ENST00000574428 EMG1Q92979 244 aaKnown RBP20.28■□□□□ 0.84
ATPAF1-213ENST00000574428 Q96M66 194 aa20.28■□□□□ 0.84
ATPAF1-213ENST00000574428 URM1Q9BTM9 101 aaKnown RBP20.28■□□□□ 0.84
ATPAF1-213ENST00000574428 A0A1W2PQ09 198 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 METTL21EPA6NDL7 271 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 NXPH2O95156 264 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 PTTG1O95997 202 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 HPXP02790 462 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 FGF12P61328 243 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 FAM58AQ8N1B3 248 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 WDR13Q9H1Z4 485 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 ST3GAL6Q9Y274 331 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 CACNG2Q9Y698 323 aa20.27■□□□□ 0.84
ATPAF1-213ENST00000574428 GABRR1P24046 479 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 RBM11P57052 281 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 TMEM69Q5SWH9 247 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 Q8IYB0 196 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 BOLLQ8N9W6 283 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 PHF21AQ96BD5 680 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 MRPS24Q96EL2 167 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 TM2D1Q9BX74 207 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 ZNF581Q9P0T4 197 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 A0A0G2JMP0 313 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 A0A0X1KG70 313 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 GEMIN2O14893 280 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 NOS1APO75052 506 aaPredicted RBP20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 ACAA1P09110 424 aaPredicted RBP20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 EGR1P18146 543 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 PITPNBP48739 271 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 TAF9Q16594 264 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 RTN4RL2Q86UN3 420 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 OR4M2Q8NGB6 313 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 ERGIC1Q969X5 290 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 SEH1LQ96EE3 360 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 DIABLOQ9NR28 239 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 DCAF16Q9NXF7 216 aa20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 FBXO9Q9UK97 447 aaPredicted RBP20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 MRPS7Q9Y2R9 242 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-213ENST00000574428 RAB27BO00194 218 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 SOCS1O15524 211 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 CPT2P23786 658 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 DUSP1P28562 367 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 PDCD1Q15116 288 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 Q8N402 240 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 GCSAMQ8N6F7 178 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 SETD6Q8TBK2 473 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 Q8TCH9 128 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 HES4Q9HCC6 221 aa20.25■□□□□ 0.83
ATPAF1-213ENST00000574428 XRCC3O43542 346 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 CYB5R3P00387 301 aaPredicted RBP20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 SPNP16150 400 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 GLRA1P23415 457 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 CDKN1AP38936 164 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 FAM89BQ8N5H3 189 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 OR11L1Q8NGX0 322 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 OR10Z1Q8NGY1 313 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 CYYR1Q96J86 154 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 RAB1BQ9H0U4 201 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 RHOFQ9HBH0 211 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 RNF7Q9UBF6 113 aa20.24■□□□□ 0.83
ATPAF1-213ENST00000574428 TRAV18A0A075B6X5 111 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 SRRM5B3KS81 715 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 CFHR2P36980 270 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms