RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 KIR2DS4P43632 304 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 FUT6P51993 359 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 DLX6P56179 175 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 HIST2H2BDQ6DRA6 164 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 SLC25A26Q70HW3 274 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 FAM220AQ7Z4H9 259 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 KLHDC1Q8N7A1 406 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 OR13D1Q8NGV5 346 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 CHST5Q9GZS9 411 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 RANBP3Q9H6Z4 567 aaPredicted RBP17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 GNG8Q9UK08 70 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 OAZ3Q9UMX2 235 aa17.13■□□□□ 0.33
CHRNB1-206ENST00000574054 C17orf98A8MV24 154 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 SERPINA3P01011 423 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 ZNF728P0DKX0 622 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 EDDM3AQ14507 147 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 FAM189A2Q15884 450 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 TP53I3Q53FA7 332 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 C11orf88Q6PI97 169 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 CRIP3Q6Q6R5 217 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 LIAT1Q6ZQX7 453 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 EGFL6Q8IUX8 553 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 CCDC54Q8NEL0 328 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 OR8J1Q8NGP2 316 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 EMG1Q92979 244 aaKnown RBP17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 RFKQ969G6 155 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 FOXRED1Q96CU9 486 aaPredicted RBP17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 BORCS8Q96FH0 119 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 GABARAPL3Q9BY60 117 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 FAM53CQ9NYF3 392 aa17.12■□□□□ 0.33
CHRNB1-206ENST00000574054 SAC3D1A6NKF1 404 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 ZNF737O75373 536 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 VSIG10L2P0DP72 767 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 DYNC1I2Q13409 638 aaKnown RBP17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 RDH10Q8IZV5 341 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 OR8H2Q8N162 312 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 DYNAPQ8N1N2 210 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 PRSS35Q8N3Z0 413 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 PIFOQ8TCI5 191 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 EME1Q96AY2 570 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 CENPNQ96H22 339 aaPredicted RBP17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 ABCB10Q9NRK6 738 aa17.11■□□□□ 0.33
CHRNB1-206ENST00000574054 CIB2O75838 187 aa17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 UBCP0CG48 685 aaKnown RBP17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 GABRR1P24046 479 aa17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 KIR3DL2P43630 455 aa17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 RAB13P51153 203 aa17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 CDC42P60953 191 aa17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 TMED1Q13445 227 aa17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 CNN3Q15417 329 aaKnown RBP17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 ZNF714Q96N38 554 aa17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 IMPAD1Q9NX62 359 aa17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 IL36RNQ9UBH0 155 aa17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 TBL2Q9Y4P3 447 aaKnown RBP17.1■□□□□ 0.33
CHRNB1-206ENST00000574054 TMEM82A0PJX8 343 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 FAM90A8PA6NJQ4 464 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 VGLL3A8MV65 326 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 ODF3BA8MYP8 253 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 ATP5HO75947 161 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 HAND1O96004 215 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 RBP4P02753 201 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 IGHV1-8P0DP01 117 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 POU3F4P49335 361 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 ATP1B3P54709 279 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 ZNF85Q03923 595 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 SSX2Q16385 188 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 TMEM219Q86XT9 240 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 DTX3Q8N9I9 347 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 RPS4Y2Q8TD47 263 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 PP6455Q8WZ26 134 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 SNX22Q96L94 193 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 CHST6Q9GZX3 395 aa17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 RBFOX1Q9NWB1 397 aaKnown RBP17.09■□□□□ 0.33
CHRNB1-206ENST00000574054 hADV38S2A0JD32 116 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 CYB5AP00167 134 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 IGHA1P01876 353 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 CALCBP10092 127 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 ZNF20P17024 532 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 DUSP1P28562 367 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 SNU13P55769 128 aaKnown RBP17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 MEF2CQ06413 473 aaPredicted RBP17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 GRK1Q15835 563 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 ZNF626Q68DY1 528 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 Q8IYB0 196 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 TPRX1Q8N7U7 411 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 C10orf35Q96D05 121 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 ADAT3Q96EY9 351 aaPredicted RBP17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 OSBPL10Q9BXB5 764 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 TCF19Q9Y242 345 aa17.08■□□□□ 0.32
CHRNB1-206ENST00000574054 PEX2P28328 305 aa17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 RBP2P50120 134 aa17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 MTCP1P56278 107 aa17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 OR12D2P58182 307 aa17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 ISL1P61371 349 aa17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 ACTA2P62736 377 aa17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 ACTG2P63267 376 aa17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 ACTC1P68032 377 aa17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 ACTA1P68133 377 aa17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 HABP2Q14520 560 aaPredicted RBP17.07■□□□□ 0.32
CHRNB1-206ENST00000574054 TCF23Q7RTU1 214 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms