RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 DHRS7CA6NNS2 312 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 SIGLEC5O15389 551 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 SYT7O43581 403 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 NOS1APO75052 506 aaPredicted RBP6.11□□□□□ -1.43
NUP88-205ENST00000572809 ENTPD6O75354 484 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 SERPINA3P01011 423 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 IGHV1-69P01742 117 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 TFF1P04155 84 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 SELLP14151 372 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 NDUFB7P17568 137 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 CCL1P22362 96 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 PRDX2P32119 198 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 CAV3P56539 151 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 SNRPGP62308 76 aaKnown RBP6.11□□□□□ -1.43
NUP88-205ENST00000572809 CD83Q01151 205 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 ZNF85Q03923 595 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 DGUOKQ16854 277 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 TP53I3Q53FA7 332 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 ACP7Q6ZNF0 438 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 C1orf122Q6ZSJ8 110 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 VMO1Q7Z5L0 202 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 KCTD20Q7Z5Y7 419 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 PDZD9Q8IXQ8 264 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 PRSS35Q8N3Z0 413 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 CBR4Q8N4T8 237 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 STPG3Q8N7X2 389 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 POC1AQ8NBT0 407 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 ZNRF1Q8ND25 227 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 CCDC54Q8NEL0 328 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 C8orf46Q8TAG6 207 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 NPRL2Q8WTW4 380 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 RNFT2Q96EX2 444 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 C9orf16Q9BUW7 83 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 S100A14Q9HCY8 104 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 TNFRSF19Q9NS68 423 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 GNG8Q9UK08 70 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 PLA2G2DQ9UNK4 145 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 SLC7A11Q9UPY5 501 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 MAB21L2Q9Y586 359 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 PCDHGB1Q9Y5G3 927 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 FAM230AA0A1W2PPH8 454 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 A0A1W2PQ09 198 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 DAPL1A0PJW8 107 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 PQLC2LA1A4F0 135 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 ANKRD61A6NGH8 418 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 RFPL4AA6NLU0 287 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 E9PQ18 207 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 RFPL4AL1F8VTS6 287 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 H3BSH0 61 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 J3QRE1 110 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 J3QT63 122 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 SYNGR1O43759 233 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 CRYBA1P05813 215 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 PGA5P0DJD9 388 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 FUT6P51993 359 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 CAPZA1P52907 286 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 BLMHQ13867 455 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 UBE2V2Q15819 145 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 TMEM244Q5VVB8 128 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 METAP1DQ6UB28 335 aaPredicted RBP6.1□□□□□ -1.43
NUP88-205ENST00000572809 ZBTB49Q6ZSB9 765 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 FAM220AQ7Z4H9 259 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 ANGPTL5Q86XS5 388 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 CALHM1Q8IU99 346 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 RDH10Q8IZV5 341 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 ZNF561Q8N587 486 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 TMEM86BQ8N661 226 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 CD177Q8N6Q3 437 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 KIR3DL3Q8N743 410 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 Q8N7P7 452 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 TMEM185AQ8NFB2 350 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 TRMT10AQ8TBZ6 339 aaKnown RBP6.1□□□□□ -1.43
NUP88-205ENST00000572809 TBC1D15Q8TC07 691 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 SDSLQ96GA7 329 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 ZNF488Q96MN9 340 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 SLC29A1Q99808 456 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 ZNF747Q9BV97 191 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 PLEKHA1Q9HB21 404 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 SIRT7Q9NRC8 400 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 AASSQ9UDR5 926 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 ZNF222Q9UK12 451 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 EXOGQ9Y2C4 368 aaKnown RBP6.1□□□□□ -1.43
NUP88-205ENST00000572809 POLDIP2Q9Y2S7 368 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 CAB39Q9Y376 341 aaPredicted RBP6.1□□□□□ -1.43
NUP88-205ENST00000572809 FAM96BQ9Y3D0 163 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 GMPPBQ9Y5P6 360 aa6.1□□□□□ -1.43
NUP88-205ENST00000572809 A0A0U1RQK1 487 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 LOC100130705A0A1B0GUX0 176 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 H0YAE9 185 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 RNASEK-C17orf49H0YIS7 233 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 J3QLW9 94 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 M0R1W7 72 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 SLC1A7O00341 560 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 MPZL2O60487 215 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 GATBO75879 557 aaKnown RBP6.09□□□□□ -1.43
NUP88-205ENST00000572809 NXPH2O95156 264 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 MELTFP08582 738 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 HTR1AP08908 422 aa6.09□□□□□ -1.43
NUP88-205ENST00000572809 UBCP0CG48 685 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms