RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PPP3R1P63098 170 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 IL13RA1P78552 427 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 INSL4Q14641 139 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 KISS1Q15726 138 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 TBCEQ15813 527 aaPredicted RBP13.11□□□□□ -0.31
CHD3-215ENST00000572750 DGUOKQ16854 277 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 LIPKQ5VXJ0 399 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 ZNF788Q6ZQV5 615 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 C1orf229Q6ZS94 237 aaPredicted RBP13.11□□□□□ -0.31
CHD3-215ENST00000572750 TMEM158Q8WZ71 300 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 UFD1Q92890 307 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 EMG1Q92979 244 aaKnown RBP13.11□□□□□ -0.31
CHD3-215ENST00000572750 DACT3Q96B18 629 aaPredicted RBP13.11□□□□□ -0.31
CHD3-215ENST00000572750 DNTTIP1Q9H147 329 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 OR14J1Q9UGF5 321 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 INSIG2Q9Y5U4 225 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 TENM1Q9UKZ4 2725 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 TRBV5-7A0A0A0MS05 114 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 IGKV1-12A0A0C4DH73 117 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 RFPL4AA6NLU0 287 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 RFPL4AL1F8VTS6 287 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 J3QLI3 93 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 SIGLEC5O15389 551 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 ALX3O95076 343 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 CYB5AP00167 134 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 IGKV1D-12P01611 117 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 CD1AP06126 327 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 CALCBP10092 127 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 SRD5A1P18405 259 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 FSTP19883 344 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 GATA3P23771 443 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 SNU13P55769 128 aaKnown RBP13.1□□□□□ -0.31
CHD3-215ENST00000572750 ZP1P60852 638 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 PDZK1IP1Q13113 114 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 ATPAF1Q5TC12 328 aaPredicted RBP13.1□□□□□ -0.31
CHD3-215ENST00000572750 DDI2Q5TDH0 399 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 MKXQ8IYA7 352 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 CD177Q8N6Q3 437 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 TMEM185AQ8NFB2 350 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 OR52N4Q8NGI2 321 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 DERL3Q96Q80 235 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 NUDT16L1Q9BRJ7 211 aaKnown RBP13.1□□□□□ -0.31
CHD3-215ENST00000572750 C7orf69Q9H7B7 122 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 ELL3Q9HB65 397 aaPredicted RBP13.1□□□□□ -0.31
CHD3-215ENST00000572750 CKLFQ9UBR5 152 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 OPN4Q9UHM6 478 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
CHD3-215ENST00000572750 GABRPO00591 440 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 MAGEB3O15480 346 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 NDUFB3O43676 98 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 ENSAO43768 121 aaKnown RBP13.09□□□□□ -0.31
CHD3-215ENST00000572750 ACAA1P09110 424 aaPredicted RBP13.09□□□□□ -0.31
CHD3-215ENST00000572750 IGFBP3P17936 291 aaPredicted RBP13.09□□□□□ -0.31
CHD3-215ENST00000572750 SRP14P37108 136 aaKnown RBP13.09□□□□□ -0.31
CHD3-215ENST00000572750 LRRC10Q5BKY1 277 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 BTNL3Q6UXE8 466 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 BTN2A1Q7KYR7 527 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 SATL1Q86VE3 508 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 ZNRF1Q8ND25 227 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 RAB40AQ8WXH6 277 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 SDSLQ96GA7 329 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 GPER1Q99527 375 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 FAM192AQ9GZU8 254 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 NOX4Q9NPH5 578 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 ACOT13Q9NPJ3 140 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 SLC25A10Q9UBX3 287 aaPredicted RBP13.09□□□□□ -0.31
CHD3-215ENST00000572750 MAB21L2Q9Y586 359 aa13.09□□□□□ -0.31
CHD3-215ENST00000572750 PIN1P1O15428 100 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 KNG1P01042 644 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 FAM157CP0CG43 387 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 NDUFB7P17568 137 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 PRKACAP17612 351 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 BDKRB2P30411 391 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 PRDX2P32119 198 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 OR3A4PP47883 348 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 CAPZA1P52907 286 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 RPS25P62851 125 aaKnown RBP13.08□□□□□ -0.32
CHD3-215ENST00000572750 MLLT11Q13015 90 aaPredicted RBP13.08□□□□□ -0.32
CHD3-215ENST00000572750 FAM27D1Q5T7N8 215 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 ZNF367Q7RTV3 350 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 Q8IYB0 196 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 TNFAIP8L1Q8WVP5 186 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
CHD3-215ENST00000572750 TMEM203Q969S6 136 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 CPNE2Q96FN4 548 aaPredicted RBP13.08□□□□□ -0.32
CHD3-215ENST00000572750 MGLLQ99685 303 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 MRI1Q9BV20 369 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 TMEM138Q9NPI0 162 aa13.08□□□□□ -0.32
CHD3-215ENST00000572750 KIR2DS1A0A191URI9 304 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 KCNAB3O43448 404 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 KDM4BO94953 1096 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 SFTPBP07988 381 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 TMEM225BP0DP42 221 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 MAPK3P27361 379 aaPredicted RBP13.07□□□□□ -0.32
CHD3-215ENST00000572750 DUSP1P28562 367 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 EMX1Q04741 257 aaPredicted RBP13.07□□□□□ -0.32
CHD3-215ENST00000572750 ACSM3Q53FZ2 586 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 CD276Q5ZPR3 534 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 C1QL2Q7Z5L3 287 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms