RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 RAB1BQ9H0U4 201 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 RERGLQ9H628 205 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ZNF442Q9H7R0 627 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 GPN1Q9HCN4 374 aaPredicted RBP3.16□□□□□ -1.9
NUP88-202ENST00000570937 MYOZ1Q9NP98 299 aaPredicted RBP3.16□□□□□ -1.9
NUP88-202ENST00000570937 TUBG2Q9NRH3 451 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 PRR34Q9NV39 138 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 B3GNT2Q9NY97 397 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 SLCO1C1Q9NYB5 712 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 SLC7A8Q9UHI5 535 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ENOPH1Q9UHY7 261 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 POMPQ9Y244 141 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 SIGLEC7Q9Y286 467 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 PDZD2O15018 2839 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 MPDZO75970 2070 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 MAST4O15021 2626 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 OTOGQ6ZRI0 2925 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 CREBBPQ92793 2442 aa3.15□□□□□ -1.9
NUP88-202ENST00000570937 CSMD2Q7Z408 3487 aa3.15□□□□□ -1.9
NUP88-202ENST00000570937 IGHV2OR16-5A0A0B4J2B6 119 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 IGHV3-38A0A0C4DH36 116 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 A0A1W2PPW3 197 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 C5orf49A4QMS7 147 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 ACOD1A6NK06 481 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 RIIAD1A6NNX1 92 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 H3BN98 237 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 NDUFS8O00217 210 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 SLC16A7O60669 478 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 SAP30O75446 220 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 SLC2A10O95528 541 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 TXNDC12O95881 172 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 CD8AP01732 235 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 SOD3P08294 240 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 COX5BP10606 129 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 ZNF35P13682 527 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 ANXA8P13928 327 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 SLC25A16P16260 332 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 ZNF823P16415 610 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 ZNF14P17017 642 aaPredicted RBP3.15□□□□□ -1.91
NUP88-202ENST00000570937 CCNOP22674 350 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 LAP3P28838 519 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 GLRXP35754 106 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 CAPGP40121 348 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 PPOXP50336 477 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 EFNA4P52798 201 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 UCP2P55851 309 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 KLF3P57682 345 aaPredicted RBP3.15□□□□□ -1.91
NUP88-202ENST00000570937 LSM6P62312 80 aaKnown RBP3.15□□□□□ -1.91
NUP88-202ENST00000570937 CBX1P83916 185 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 MYBPC1Q00872 1141 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 FMODQ06828 376 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 SNTB2Q13425 540 aaKnown RBP3.15□□□□□ -1.91
NUP88-202ENST00000570937 AQP6Q13520 282 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 KRR1Q13601 381 aaKnown RBP3.15□□□□□ -1.91
NUP88-202ENST00000570937 CLEC12BQ2HXU8 276 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 IQCCQ4KMZ1 466 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 MESTQ5EB52 335 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 PABPC1L2AQ5JQF8 200 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 SLC25A30Q5SVS4 291 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 C1orf146Q5VVC0 180 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 LEG1Q6P5S2 330 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 C16orf87Q6PH81 154 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 CLEC2AQ6UVW9 174 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 UGT2A3Q6UWM9 527 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 Q6ZR54 194 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 RASSF6Q6ZTQ3 369 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 FAM122BQ7Z309 247 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 TSEN54Q7Z6J9 526 aaKnown RBP3.15□□□□□ -1.91
NUP88-202ENST00000570937 BIVMQ86UB2 503 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 MEX3DQ86XN8 651 aaKnown RBP3.15□□□□□ -1.91
NUP88-202ENST00000570937 CLDN22Q8N7P3 220 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 LRRC75AQ8NAA5 344 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 DRAXINQ8NBI3 349 aaPredicted RBP3.15□□□□□ -1.91
NUP88-202ENST00000570937 OR2T33Q8NG76 320 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 OR10G2Q8NGC3 310 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 OR5L1Q8NGL2 311 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 OR2T4Q8NH00 348 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 TEX47Q8TBZ9 253 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 GIPC3Q8TF64 312 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 CANT1Q8WVQ1 401 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 DNAJC9Q8WXX5 260 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 PLEKHA8Q96JA3 519 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 Q96M85 177 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 NMNAT3Q96T66 252 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 OSBPL10Q9BXB5 764 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 CACNG6Q9BXT2 260 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 PRRG3Q9BZD7 231 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 OR2H1Q9GZK4 316 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 SYT4Q9H2B2 425 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 OR52D1Q9H346 318 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 RIMS4Q9H426 269 aaPredicted RBP3.15□□□□□ -1.91
NUP88-202ENST00000570937 ELOVL3Q9HB03 270 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 NOX3Q9HBY0 568 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 DYNLRB1Q9NP97 96 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 IL20Q9NYY1 176 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 DNAJB9Q9UBS3 223 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 IL20RAQ9UHF4 553 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 KLHL21Q9UJP4 597 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 POLR1DQ9Y2S0 133 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms