RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 KLRB1Q12918 225 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SKP2Q13309 424 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 KIAA0141Q14154 515 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 ZNF169Q14929 603 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 SPHARQ15513 63 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 GABRA6Q16445 453 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SPDYE7PQ495Y7 208 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PLK5Q496M5 336 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ZNF672Q499Z4 452 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 TRMT12Q53H54 448 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 SOHLH1Q5JUK2 328 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ACTL10Q5JWF8 245 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ELFN2Q5R3F8 820 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 VASNQ6EMK4 673 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SLC48A1Q6P1K1 146 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ZNF585AQ6P3V2 769 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 GUSBP11Q6P575 273 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SMARCD3Q6STE5 483 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PAQR6Q6TCH4 344 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 TMEM205Q6UW68 189 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 GDPGP1Q6ZNW5 385 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 LINGO2Q7L985 606 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ANKRD37Q7Z713 158 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ZAR1Q86SH2 424 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 WFDC8Q8IUA0 241 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SLC30A8Q8IWU4 369 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 UBALD2Q8IYN6 164 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 RDH10Q8IZV5 341 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SLC34A3Q8N130 599 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 MFSD4AQ8N468 514 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 TMEM217Q8N7C4 229 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 TMEM99Q8N816 258 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 GJC3Q8NFK1 279 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SLC26A10Q8NG04 563 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 OR4M2Q8NGB6 313 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 OR1K1Q8NGR3 316 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 LYPD6BQ8NI32 183 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PLPPR1Q8TBJ4 325 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SLC38A5Q8WUX1 472 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 CCDC107Q8WV48 283 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SSMEM1Q8WWF3 244 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 XAGE5Q8WWM1 108 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PIK3R3Q92569 461 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 FKBP10Q96AY3 582 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 UPRTQ96BW1 309 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 NTNG2Q96CW9 530 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 BPIFA2Q96DR5 249 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 NEURL3Q96EH8 262 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 CPNE2Q96FN4 548 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 PEX11GQ96HA9 241 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 TMEM19Q96HH6 336 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 C20orf173Q96LM9 149 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 OR7D2Q96RA2 312 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 CNN2Q99439 309 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 WDR77Q9BQA1 342 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 TMEM208Q9BTX3 173 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 G6PC3Q9BUM1 346 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 TRAF4Q9BUZ4 470 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 CCDC32Q9BV29 185 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 FAIM2Q9BWQ8 316 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 NXF2Q9GZY0 626 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 NAA50Q9GZZ1 169 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 GABARAPL1Q9H0R8 117 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 DSN1Q9H410 356 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 DUSP21Q9H596 190 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ZNF703Q9H7S9 590 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 AKIP1Q9NQ31 210 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 FGF21Q9NSA1 209 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 DLL3Q9NYJ7 618 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 B4GALT7Q9UBV7 327 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ZNF223Q9UK11 482 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 PILRBQ9UKJ0 227 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SAMD4AQ9UPU9 718 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 NTNG1Q9Y2I2 539 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 UFC1Q9Y3C8 167 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 CHST2Q9Y4C5 530 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 NCOA6Q14686 2063 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 MYO7BQ6PIF6 2116 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ALPK2Q86TB3 2170 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 A0A0B4J2E0 115 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 A0A0G2JNJ9 132 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 A0A1B0GX12 115 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 RPS10-NUDT3A0A1W2PQS6 291 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 IGSF23A1L1A6 192 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TLCD2A6NGC4 264 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TVP23AA6NH52 213 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TMEM200CA6NKL6 621 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ZAR1LA6NP61 321 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ADARB2-AS1A8MUL3 147 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 FAM157AC9JC47 383 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 H3BMH7 237 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TRAPPC2LH3BP13 241 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 J3QLI3 93 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 J3QR06 171 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 M0R129 80 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 AP4M1O00189 453 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 FFAR1O14842 300 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 SIGLEC5O15389 551 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 OIP5O43482 229 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms