RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 UBALD1Q8TB05 177 aa13.57□□□□□ -0.24
CIITA-204ENST00000570546 EDEM2Q9BV94 578 aa13.57□□□□□ -0.24
CIITA-204ENST00000570546 TOLLIPQ9H0E2 274 aa13.57□□□□□ -0.24
CIITA-204ENST00000570546 KIAA0100Q14667 2235 aaKnown RBP13.57□□□□□ -0.24
CIITA-204ENST00000570546 CEACAM6P40199 344 aa13.57□□□□□ -0.24
CIITA-204ENST00000570546 UBE2G2P60604 165 aa13.57□□□□□ -0.24
CIITA-204ENST00000570546 TFF2Q03403 129 aa13.57□□□□□ -0.24
CIITA-204ENST00000570546 ACER2Q5QJU3 275 aa13.57□□□□□ -0.24
CIITA-204ENST00000570546 ARRDC1-AS1Q9H2J1 176 aa13.57□□□□□ -0.24
CIITA-204ENST00000570546 POMT1Q9Y6A1 747 aa13.57□□□□□ -0.24
CIITA-204ENST00000570546 hCG_1809904A0A1W2PP81 198 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 A0A1W2PPE2 198 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 A0A1W2PR64 198 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 A0A1W2PRV1 198 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 CA6P23280 308 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 CALCRP30988 508 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 ADAT3Q96EY9 351 aaPredicted RBP13.56□□□□□ -0.24
CIITA-204ENST00000570546 ZNF638Q14966 1978 aaKnown RBP13.56□□□□□ -0.24
CIITA-204ENST00000570546 TRPM6Q9BX84 2022 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 CRYAAP02489 173 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 NOVA1P51513 510 aaKnown RBP13.56□□□□□ -0.24
CIITA-204ENST00000570546 MLF1P58340 268 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 CLEC9AQ6UXN8 241 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 IFT22Q9H7X7 185 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 WNT16Q9UBV4 365 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 LTBP1Q14766 1721 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 UBE2G1P62253 170 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 MS4A7Q9GZW8 240 aaPredicted RBP13.56□□□□□ -0.24
CIITA-204ENST00000570546 KRASP01116 189 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 RNPS1Q15287 305 aaKnown RBP13.56□□□□□ -0.24
CIITA-204ENST00000570546 FAM24BQ8N5W8 94 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 FAM181AQ8N9Y4 354 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 OR11G2Q8NGC1 345 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 OR10V1Q8NGI7 309 aa13.56□□□□□ -0.24
CIITA-204ENST00000570546 TRBV5-5A0A0J9YX44 114 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 DEFA4P12838 97 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 CCL2P13500 99 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 ZBTB25P24278 435 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 MMP16P51512 607 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 PHYHD1Q5SRE7 291 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 ZNF574Q6ZN55 896 aaPredicted RBP13.55□□□□□ -0.24
CIITA-204ENST00000570546 C10orf35Q96D05 121 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 ALX4Q9H161 411 aaPredicted RBP13.55□□□□□ -0.24
CIITA-204ENST00000570546 STARD10Q9Y365 291 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 RALGAPA2Q2PPJ7 1873 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 A0A1W2PPC1 479 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 COL13A1Q5TAT6 717 aaPredicted RBP13.55□□□□□ -0.24
CIITA-204ENST00000570546 TSPO2Q5TGU0 170 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 ZFP64Q9NPA5 681 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 TAAR3PQ9P1P4 343 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 IL2RAP01589 272 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 IGHV4-34P06331 123 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 RPS4Y1P22090 263 aaKnown RBP13.55□□□□□ -0.24
CIITA-204ENST00000570546 P2RY1P47900 373 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 SCGB2A2Q13296 93 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 ZNF345Q14585 488 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 MOGAT2Q3SYC2 334 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 DBX2Q6ZNG2 339 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 KDF1Q8NAX2 398 aaPredicted RBP13.55□□□□□ -0.24
CIITA-204ENST00000570546 MRPS24Q96EL2 167 aaKnown RBP13.55□□□□□ -0.24
CIITA-204ENST00000570546 KCNE5Q9UJ90 142 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 TNFSF18Q9UNG2 199 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 A0A1W2PPH5 198 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 OR2M5A3KFT3 312 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 G3V3Q6 166 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 MASP2O00187 686 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 GPR37O15354 613 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 DCAF12L2Q5VW00 463 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 CXorf67Q86X51 503 aaPredicted RBP13.55□□□□□ -0.24
CIITA-204ENST00000570546 TPPP3Q9BW30 176 aa13.55□□□□□ -0.24
CIITA-204ENST00000570546 CYTIPO60759 359 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 MDH2P40926 338 aaKnown RBP13.54□□□□□ -0.24
CIITA-204ENST00000570546 TIGITQ495A1 244 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 FAM209AQ5JX71 171 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 OR10X1Q8NGY0 326 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 M1APQ8TC57 530 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 PTX4Q96A99 478 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 GPX7Q96SL4 187 aaPredicted RBP13.54□□□□□ -0.24
CIITA-204ENST00000570546 ZNF320A2RRD8 509 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 NGFP01138 241 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 RAC3P60763 192 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 SLC38A11Q08AI6 406 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 TMEM18Q96B42 140 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 BSCL2Q96G97 398 aaPredicted RBP13.54□□□□□ -0.24
CIITA-204ENST00000570546 WDR13Q9H1Z4 485 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 MMP24Q9Y5R2 645 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 CACNA1CQ13936 2221 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 PLXNA1Q9UIW2 1896 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 TRGV5A0A0B4J1U4 118 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 ERVH48-1M5A8F1 160 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 OR7C2O60412 319 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 LPAR6P43657 344 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 ALKBH6Q3KRA9 238 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 TMEM104Q8NE00 496 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 SDHCQ99643 169 aaPredicted RBP13.54□□□□□ -0.24
CIITA-204ENST00000570546 SEC11CQ9BY50 192 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 ESRP2Q9H6T0 727 aaKnown RBP13.54□□□□□ -0.24
CIITA-204ENST00000570546 LPAR3Q9UBY5 353 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 CACNG5Q9UF02 275 aa13.54□□□□□ -0.24
CIITA-204ENST00000570546 CACFD1Q9UGQ2 172 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms