RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 LRRC28Q86X40 367 aaPredicted RBP13.45□□□□□ -0.26
USB1-215ENST00000569252 FAM90A1Q86YD7 464 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 CROCCP3Q8IVE0 287 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 FAM58AQ8N1B3 248 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 OR6M1Q8NGM8 313 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 RAB2BQ8WUD1 216 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 C12orf43Q96C57 262 aaKnown RBP13.45□□□□□ -0.26
USB1-215ENST00000569252 MTCH1Q9NZJ7 389 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 NLKQ9UBE8 527 aa13.45□□□□□ -0.26
USB1-215ENST00000569252 CHD3Q12873 2000 aaKnown RBP13.45□□□□□ -0.26
USB1-215ENST00000569252 DYSFO75923 2080 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 IGHV4-30-2A0A087WSY4 118 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 ADRA2CP18825 462 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 BCL3P20749 454 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
USB1-215ENST00000569252 GABRA2P47869 451 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 SERPINB10P48595 397 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 TMBIM6P55061 237 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 ZP1P60852 638 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 SLC22A6Q4U2R8 563 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 TMEM155Q4W5P6 130 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 ACP7Q6ZNF0 438 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 NLRC3Q7RTR2 1065 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 BATF2Q8N1L9 274 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 ZNF488Q96MN9 340 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 NRIP2Q9BQI9 281 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 CST11Q9H112 138 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 NARFLQ9H6Q4 476 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 TMEM165Q9HC07 324 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 DCAF16Q9NXF7 216 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 MIOXQ9UGB7 285 aa13.44□□□□□ -0.26
USB1-215ENST00000569252 IGHV3OR15-7A0A075B7D8 119 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 NKX6-3A6NJ46 265 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 OR2AT4A6NND4 320 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 NOTOA8MTQ0 251 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 SLC17A2O00624 439 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 WNT9BO14905 357 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 IGHV2-70P01814 119 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 GTF2F2P13984 249 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 ARSBP15848 533 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 PRKACAP17612 351 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 CPT2P23786 658 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 VBP1P61758 197 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 ZMYND11Q15326 602 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 C1orf100Q5SVJ3 147 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 FAM201AQ5SY85 155 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 TEX36Q5VZQ5 186 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 DNM1P46Q6ZS02 220 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 USP43Q70EL4 1123 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 SLC36A1Q7Z2H8 476 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 C19orf18Q8NEA5 215 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 TBC1D15Q8TC07 691 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 RAB39BQ96DA2 213 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 BCL7BQ9BQE9 202 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 REG4Q9BYZ8 158 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 WDR13Q9H1Z4 485 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 RNF167Q9H6Y7 350 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 NDUFA13Q9P0J0 144 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 OR14J1Q9UGF5 321 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 STEAP1Q9UHE8 339 aa13.43□□□□□ -0.26
USB1-215ENST00000569252 CR1P17927 2039 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 ABCA1O95477 2261 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 H3BUI4 141 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 SH2D1BO14796 132 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 CRTAPO75718 401 aaPredicted RBP13.42□□□□□ -0.26
USB1-215ENST00000569252 GABARAPO95166 117 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 KNG1P01042 644 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 IL1AP01583 271 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 GYPAP02724 150 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 EGR1P18146 543 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 SERPINA2P20848 420 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 NPBWR2P48146 333 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 ZNF404Q494X3 552 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 HES5Q5TA89 166 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 ASCL4Q6XD76 172 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 DCDC5Q6ZRR9 648 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 RNF144BQ7Z419 303 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 OSR2Q8N2R0 312 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 OR5T2Q8NGG2 359 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 OR4D6Q8NGJ1 314 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 MRPS24Q96EL2 167 aaKnown RBP13.42□□□□□ -0.26
USB1-215ENST00000569252 MED30Q96HR3 178 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 NKX3-1Q99801 234 aaPredicted RBP13.42□□□□□ -0.26
USB1-215ENST00000569252 TMEM246Q9BRR3 403 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 HMG20AQ9NP66 347 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 RBFOX1Q9NWB1 397 aaKnown RBP13.42□□□□□ -0.26
USB1-215ENST00000569252 IL36GQ9NZH8 169 aa13.42□□□□□ -0.26
USB1-215ENST00000569252 RFPL4AA6NLU0 287 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 IFITM5A6NNB3 132 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 VWC2LB2RUY7 222 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 RNF223E7ERA6 249 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 RFPL4AL1F8VTS6 287 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 AIPO00170 330 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 SLC22A1O15245 554 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 TMPRSS2O15393 492 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 TMEM127O75204 238 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 BPNT1O95861 308 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 CALCBP10092 127 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 RPS2P15880 293 aaKnown RBP13.41□□□□□ -0.26
USB1-215ENST00000569252 PRDX2P32119 198 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms