RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 OR6K3Q8NGY3 331 aa4□□□□□ -1.77
UBR1-208ENST00000569066 OR5B12Q96R08 314 aa4□□□□□ -1.77
UBR1-208ENST00000569066 BEX1Q9HBH7 125 aa4□□□□□ -1.77
UBR1-208ENST00000569066 EML4Q9HC35 981 aaKnown RBP4□□□□□ -1.77
UBR1-208ENST00000569066 AHSPQ9NZD4 102 aa4□□□□□ -1.77
UBR1-208ENST00000569066 LGALS13Q9UHV8 139 aa4□□□□□ -1.77
UBR1-208ENST00000569066 SCP2D1Q9UJQ7 156 aa4□□□□□ -1.77
UBR1-208ENST00000569066 RHBDD3Q9Y3P4 386 aa4□□□□□ -1.77
UBR1-208ENST00000569066 NOTCH3Q9UM47 2321 aa4□□□□□ -1.77
UBR1-208ENST00000569066 CHD2O14647 1828 aaKnown RBP3.99□□□□□ -1.77
UBR1-208ENST00000569066 GRIN2BQ13224 1484 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 AKAP11Q9UKA4 1901 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 ZNF726A6NNF4 738 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 DFFAO00273 331 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 TP53I11O14683 189 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 CHST1O43916 411 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 HPNP05981 417 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 STAG3L2P0CL84 134 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 CCL2P13500 99 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 SRMP19623 302 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 GABRR1P24046 479 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 HLA-DMAP28067 261 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 TEAD1P28347 426 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 HTR1EP28566 365 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 ATP5J2P56134 94 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 RGS8P57771 180 aaPredicted RBP3.99□□□□□ -1.77
UBR1-208ENST00000569066 CDNFQ49AH0 187 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 CLEC6AQ6EIG7 209 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 REEP3Q6NUK4 255 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 HAGHLQ6PII5 290 aaPredicted RBP3.99□□□□□ -1.77
UBR1-208ENST00000569066 LINC00173Q6ZV60 143 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 PHF13Q86YI8 300 aaPredicted RBP3.99□□□□□ -1.77
UBR1-208ENST00000569066 ZNF502Q8TBZ5 544 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 GPR151Q8TDV0 419 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 TMEM54Q969K7 222 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 PPWD1Q96BP3 646 aaKnown RBP3.99□□□□□ -1.77
UBR1-208ENST00000569066 TMED9Q9BVK6 235 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 DCSTAMPQ9H295 470 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 ISYNA1Q9NPH2 558 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 TMEM138Q9NPI0 162 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 PRR34Q9NV39 138 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 OPTCQ9UBM4 332 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 ZNF223Q9UK11 482 aaPredicted RBP3.99□□□□□ -1.77
UBR1-208ENST00000569066 ADGRB3O60242 1522 aa3.99□□□□□ -1.77
UBR1-208ENST00000569066 TRBV11-1A0A0K0K1C0 115 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 C1orf196B1AJZ1 125 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 SUPT3HB4E1H0 165 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 TSTD3H0UI37 97 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 GABARAPO95166 117 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 TTC4O95801 387 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 HLA-GP17693 338 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 CA5AP35218 305 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 ARR3P36575 388 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 CRISP1P54107 249 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 SLC18A1P54219 525 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 LSM3P62310 102 aaKnown RBP3.98□□□□□ -1.77
UBR1-208ENST00000569066 DCDP81605 110 aaKnown RBP3.98□□□□□ -1.77
UBR1-208ENST00000569066 CDK6Q00534 326 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 BIKQ13323 160 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 SCGB2B2Q4G0G5 96 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 CASC10Q5T4H9 136 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 ZNF773Q6PK81 442 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 PLET1Q6UQ28 207 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 CD300LGQ6UXG3 332 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 STRADAQ7RTN6 431 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 CMTM1Q8IZ96 169 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 ATPAF2Q8N5M1 289 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 SUMF2Q8NBJ7 301 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 OR4A4PQ8NGN8 299 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 NUBPLQ8TB37 319 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 TEX37Q96LM6 180 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 CDC42EP4Q9H3Q1 356 aaKnown RBP3.98□□□□□ -1.77
UBR1-208ENST00000569066 CLMPQ9H6B4 373 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 SLC17A7Q9P2U7 560 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 TBL2Q9Y4P3 447 aaKnown RBP3.98□□□□□ -1.77
UBR1-208ENST00000569066 KIF25-AS1Q9Y6Z4 181 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 CFAP43Q8NDM7 1665 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 A0A0G2JN53 185 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 FABP7O15540 132 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 EEDO75530 441 aaKnown RBP3.98□□□□□ -1.77
UBR1-208ENST00000569066 ARG1P05089 322 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 NMBP08949 121 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 MYL9P24844 172 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 TGFBR1P36897 503 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 IFNGR2P38484 337 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 TFPI2P48307 235 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 MLF1P58340 268 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 RAB5BP61020 215 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 STXBP1P61764 594 aaKnown RBP3.98□□□□□ -1.77
UBR1-208ENST00000569066 ZNF92Q03936 586 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 RCAN2Q14206 197 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 PSG5Q15238 335 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 C5orf64Q2M2E5 130 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 FHL5Q5TD97 284 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 C9orf135Q5VTT2 229 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 SSX6Q7RTT6 188 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 DEFB107AQ8IZN7 70 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 PGAM4Q8N0Y7 254 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 METTL13Q8N6R0 699 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 ZFP41Q8N8Y5 198 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms