RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	IGKV1-12	A0A0C4DH73	117 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	RFPL4A	A6NLU0	287 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CYSRT1	A8MQ03	144 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	NOTO	A8MTQ0	251 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	RFPL4AL1	F8VTS6	287 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499		H3BUI4	141 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	SLC17A2	O00624	439 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	SH2D1B	O14796	132 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	SLC22A1	O15245	554 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	TMPRSS2	O15393	492 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	IGKV1D-12	P01611	117 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	PSG2	P11465	335 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	SERPINA2	P20848	420 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	PRDX2	P32119	198 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	SDC2	P34741	201 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	FGF12	P61328	243 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	LSM3	P62310	102 aa	Known RBP	12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	HNRNPA0	Q13151	305 aa	Known RBP	12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	SLC22A6	Q4U2R8	563 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ESCO2	Q56NI9	601 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ATPAF1	Q5TC12	328 aa	Predicted RBP	12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	STUM	Q69YW2	141 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	RNF144B	Q7Z419	303 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CROCCP3	Q8IVE0	287 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	BATF2	Q8N1L9	274 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	OR5T2	Q8NGG2	359 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	OR4D6	Q8NGJ1	314 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	OR14J1	Q9UGF5	321 aa		12.46	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CSMD1	Q96PZ7	3565 aa		12.46	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CHD3	Q12873	2000 aa	Known RBP	12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	SMAD7	O15105	426 aa	Known RBP	12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	NDUFB3	O43676	98 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	TMEM127	O75204	238 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	BPNT1	O95861	308 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	IGHV2-5	P01817	119 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	SFTPB	P07988	381 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CHRM2	P08172	466 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CD37	P11049	281 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	ARSB	P15848	533 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	RBMX	P38159	391 aa	Known RBP	12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	GZMK	P49863	264 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	NPY4R	P50391	375 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	IL13RA1	P78552	427 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	MXD1	Q05195	221 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	DGUOK	Q16854	277 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	LRRC10	Q5BKY1	277 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CRIP3	Q6Q6R5	217 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	C1QL2	Q7Z5L3	287 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	OSR2	Q8N2R0	312 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	ZNF561	Q8N587	486 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	OR10K1	Q8NGX5	313 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	ANGPTL6	Q8NI99	470 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	PPP1R35	Q8TAP8	253 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	RAB2B	Q8WUD1	216 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	SEH1L	Q96EE3	360 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CCL13	Q99616	98 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	NKX3-1	Q99801	234 aa	Predicted RBP	12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	BCL7B	Q9BQE9	202 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	SEBOX	Q9HB31	216 aa	Predicted RBP	12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	KAAG1	Q9UBP8	84 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CLN8	Q9UBY8	286 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	STEAP1	Q9UHE8	339 aa		12.45	□□□□□ -0.42
KLHDC4-223	ENST00000568499	IFITM5	A6NNB3	132 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499		F8VVB4	439 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499		F8VWA3	439 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	AIP	O00170	330 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	GPR37	O15354	613 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	FOXH1	O75593	365 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CRTAP	O75718	401 aa	Predicted RBP	12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	GABARAP	O95166	117 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	IL1A	P01583	271 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	WNT2	P09544	360 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CD99	P14209	185 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	SERPINB10	P48595	397 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	PITPNB	P48739	271 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	TMBIM6	P55061	237 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	SNU13	P55769	128 aa	Known RBP	12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	LMO4	P61968	165 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	GNB2	P62879	340 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	HOXA4	Q00056	320 aa	Predicted RBP	12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	IL13RA2	Q14627	380 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	ZNF146	Q15072	292 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	FAM189A2	Q15884	450 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	USP43	Q70EL4	1123 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	LINC00596	Q86U02	117 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	LYPD6	Q86Y78	171 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499		Q8NFD4	153 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	KCNG3	Q8TAE7	436 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	C18orf12	Q96KH6	178 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	MRI1	Q9BV20	369 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	RNF167	Q9H6Y7	350 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	ST3GAL6	Q9Y274	331 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	MYO9A	B2RTY4	2548 aa		12.44	□□□□□ -0.42
KLHDC4-223	ENST00000568499	CREBBP	Q92793	2442 aa		12.43	□□□□□ -0.42
KLHDC4-223	ENST00000568499	IGKV1D-17	A0A075B6S4	117 aa		12.43	□□□□□ -0.42
KLHDC4-223	ENST00000568499	SHISA3	A0PJX4	238 aa		12.43	□□□□□ -0.42
KLHDC4-223	ENST00000568499		B4DSR2	109 aa		12.43	□□□□□ -0.42
KLHDC4-223	ENST00000568499	DEGS1	O15121	323 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms