RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CHRNA7P36544 502 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 MMP16P51512 607 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 DYNLT3P51808 116 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2BDP58876 126 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2BCP62807 126 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 EWSR1Q01844 656 aaKnown RBP eCLIP9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST2H2BEQ16778 126 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.61□□□□□ -0.87
PALB2-206ENST00000568219 PLCXD3Q63HM9 321 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 OR10AD1Q8NGE0 317 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 OR4F5Q8NH21 305 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 SPPL3Q8TCT6 385 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2BHQ93079 126 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 OR4F4Q96R69 305 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2BNQ99877 126 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2BMQ99879 126 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 TMEM100Q9NV29 134 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 FUT9Q9Y231 359 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 VWA8A3KMH1 1905 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 TRAV34A0A0B4J273 112 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 FAM221BA6H8Z2 402 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 NKX2-6A6NCS4 301 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 TRAPPC6AO75865 159 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 DANCRP0C864 163 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H1BP16401 226 aaKnown RBP9.61□□□□□ -0.87
PALB2-206ENST00000568219 GPR3P46089 330 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HTR5AP47898 357 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 DCDP81605 110 aaKnown RBP9.61□□□□□ -0.87
PALB2-206ENST00000568219 PNLIPRP3Q17RR3 467 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 TOMM20LQ6UXN7 152 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 OR13D1Q8NGV5 346 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 TMEM230Q96A57 120 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 BMFQ96LC9 184 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 PECRQ9BY49 303 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 UCK1Q9HA47 277 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 CALHM2Q9HA72 323 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 CEP250Q9BV73 2442 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 CXorf51AA0A1B0GTR3 108 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 DHRS7CA6NNS2 312 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 SOD3P08294 240 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 CXCL1P09341 107 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 CARD18P57730 90 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 PLAURQ03405 335 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 C1orf100Q5SVJ3 147 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 ETFRF1Q6IPR1 90 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 SPTSSAQ969W0 71 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 GNPNAT1Q96EK6 184 aaPredicted RBP9.61□□□□□ -0.87
PALB2-206ENST00000568219 RTBDNQ9BSG5 229 aaPredicted RBP9.61□□□□□ -0.87
PALB2-206ENST00000568219 NAA60Q9H7X0 242 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 ZNF107Q9UII5 783 aaPredicted RBP9.61□□□□□ -0.87
PALB2-206ENST00000568219 KIR2DS5A0A0G2JLQ3 304 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 A0A0G2JNG1 304 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 ZNF320A2RRD8 509 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 SERPINE3A8MV23 424 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 KIR2DS3K7RE56 304 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 M0R143 59 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 TAS2R60P59551 318 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 KIR2DS5Q14953 304 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 C1QL2Q7Z5L3 287 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 BAGE3Q86Y29 109 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 BAGE2Q86Y30 109 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 PAQR4Q8N4S7 273 aaPredicted RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 ZNF296Q8WUU4 475 aaPredicted RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 ZNF845Q96IR2 970 aaPredicted RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 RPP25Q9BUL9 199 aaKnown RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 SIRT7Q9NRC8 400 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 ANXA10Q9UJ72 324 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 MCTS1Q9ULC4 181 aaKnown RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 ST3GAL6Q9Y274 331 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 NOSIPQ9Y314 301 aaKnown RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 HELZP42694 1942 aaKnown RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 CST2P09228 141 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 PGA3P0DJD8 388 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 DLX2Q07687 328 aaPredicted RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 FHL1Q13642 323 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 CYYR1Q96J86 154 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 MYOZ1Q9NP98 299 aaPredicted RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 SLC2A9Q9NRM0 540 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 OSGIN2Q9Y236 505 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 ZNF318Q5VUA4 2279 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 GVINP1Q7Z2Y8 2422 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 PMS2P1A4D2B8 440 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 DVL1O14640 695 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 CLDN1O95832 211 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 IGHV3-9P01782 118 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 AADACP22760 399 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 TMEM50BP56557 158 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 TMEM196Q5HYL7 178 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 GPX7Q96SL4 187 aaPredicted RBP9.6□□□□□ -0.87
PALB2-206ENST00000568219 ULBP2Q9BZM5 246 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 PLEKHF2Q9H8W4 249 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 SRPK3Q9UPE1 567 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 SHANK1Q9Y566 2161 aa9.6□□□□□ -0.87
PALB2-206ENST00000568219 FANCMQ8IYD8 2048 aa9.59□□□□□ -0.87
PALB2-206ENST00000568219 IGLV1-36A0A0B4J1U3 117 aa9.59□□□□□ -0.87
PALB2-206ENST00000568219 CHST1O43916 411 aa9.59□□□□□ -0.87
PALB2-206ENST00000568219 ZNF217O75362 1048 aa9.59□□□□□ -0.87
PALB2-206ENST00000568219 BGLAPP02818 100 aa9.59□□□□□ -0.87
PALB2-206ENST00000568219 METTL15P1P0C7V9 234 aa9.59□□□□□ -0.87
PALB2-206ENST00000568219 FCARP24071 287 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms