RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 BTN2A1Q7KYR7 527 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 SERPINA12Q8IW75 414 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 ZNRF1Q8ND25 227 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 LY6G5BQ8NDX9 201 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 MYDGFQ969H8 173 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 TMEM106AQ96A25 262 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 RFT1Q96AA3 541 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 UPRTQ96BW1 309 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 ORAI1Q96D31 301 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 CEP19Q96LK0 163 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 MND1Q9BWT6 205 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 ELL3Q9HB65 397 aaPredicted RBP8.1□□□□□ -1.11
CLK3-220ENST00000567992 RBFOX1Q9NWB1 397 aaKnown RBP8.1□□□□□ -1.11
CLK3-220ENST00000567992 SCN3BQ9NY72 215 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 RPUSD1Q9UJJ7 312 aaKnown RBP8.1□□□□□ -1.11
CLK3-220ENST00000567992 ERGIC3Q9Y282 383 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 AUP1Q9Y679 476 aa8.1□□□□□ -1.11
CLK3-220ENST00000567992 DSCAML1Q8TD84 2053 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 PNMA8CA0A1B0GUJ8 204 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 PIN1P1O15428 100 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 RGS10O43665 173 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 NDUFB3O43676 98 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 ANGPTL7O43827 346 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 ZNF737O75373 536 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 KDM4BO94953 1096 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 ECDO95905 644 aaPredicted RBP8.09□□□□□ -1.11
CLK3-220ENST00000567992 KNG1P01042 644 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 IGHV4-38-2P0DP08 117 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 IGFBP3P17936 291 aaPredicted RBP8.09□□□□□ -1.11
CLK3-220ENST00000567992 GABRA2P47869 451 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 POU3F4P49335 361 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 CAV3P56539 151 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 FGF12P61328 243 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 KISS1Q15726 138 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 Q499Y3 187 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 LRRC10Q5BKY1 277 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 CD276Q5ZPR3 534 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 BTNL3Q6UXE8 466 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 TEX29Q8N6K0 151 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 OR5D18Q8NGL1 313 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 OR5D14Q8NGL3 314 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 C8orf46Q8TAG6 207 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 NANPQ8TBE9 248 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 OR14A2Q96R54 314 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 TBX15Q96SF7 602 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 DCTN5Q9BTE1 182 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 MRI1Q9BV20 369 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 FAM192AQ9GZU8 254 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 SIRPDQ9H106 197 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 SLC25A10Q9UBX3 287 aaPredicted RBP8.09□□□□□ -1.11
CLK3-220ENST00000567992 TPRKBQ9Y3C4 175 aa8.09□□□□□ -1.11
CLK3-220ENST00000567992 TRAV8-7A0A075B6U6 113 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 ZNF879B4DU55 563 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 GABRPO00591 440 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 GPR37O15354 613 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 GPX5O75715 221 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 INMTO95050 263 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 CD2P06729 351 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 SFTPBP07988 381 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 HCKP08631 526 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 CELP19835 753 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 FSTP19883 344 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 RAB3AP20336 220 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 EPHA1P21709 976 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 PRDX2P32119 198 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 SPHARQ15513 63 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 ARMCX4Q5H9R4 360 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 RBM48Q5RL73 367 aaKnown RBP8.08□□□□□ -1.12
CLK3-220ENST00000567992 PRSS48Q7RTY5 328 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 MKXQ8IYA7 352 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 Q8IYB0 196 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 TMEM185AQ8NFB2 350 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 OR52N4Q8NGI2 321 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 EMG1Q92979 244 aaKnown RBP8.08□□□□□ -1.12
CLK3-220ENST00000567992 MED30Q96HR3 178 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 DERL3Q96Q80 235 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 NKX3-1Q99801 234 aaPredicted RBP8.08□□□□□ -1.12
CLK3-220ENST00000567992 Q9H521 79 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 OR14J1Q9UGF5 321 aa8.08□□□□□ -1.12
CLK3-220ENST00000567992 TRAV40A0A0B4J280 105 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 TMEM82A0PJX8 343 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 SC5DO75845 299 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 ALDOBP05062 364 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 LIPFP07098 398 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 CALCBP10092 127 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 NDUFB7P17568 137 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 MAP2K4P45985 399 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 GP2P55259 537 aaKnown RBP8.07□□□□□ -1.12
CLK3-220ENST00000567992 GABARAPL2P60520 117 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 SRSF2Q01130 221 aaKnown RBP8.07□□□□□ -1.12
CLK3-220ENST00000567992 COL10A1Q03692 680 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 INSL4Q14641 139 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 ZNF146Q15072 292 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 MED22Q15528 200 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 LYPD6Q86Y78 171 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 SAXO1Q8IYX7 474 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 FAM58AQ8N1B3 248 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 ZNF561Q8N587 486 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 Q8N7P7 452 aa8.07□□□□□ -1.12
CLK3-220ENST00000567992 PNLDC1Q8NA58 520 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms