RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 MED19A0JLT2 244 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF727A8MUV8 499 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 H3BML4 177 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 CXCL1P09341 107 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 FBLP22087 321 aaKnown RBP13.67□□□□□ -0.22
COMMD4-215ENST00000566843 DTYMKP23919 212 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 FBXW4P57775 412 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 CD81P60033 236 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 RNF4P78317 190 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 MYBPHQ13203 477 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 DMRTC1Q5HYR2 192 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 LGI3Q8N145 548 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 D2HGDHQ8N465 521 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 RBM14Q96PK6 669 aaKnown RBP13.67□□□□□ -0.22
COMMD4-215ENST00000566843 ANGPTL4Q9BY76 406 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 VN1R1Q9GZP7 353 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 UFSP2Q9NUQ7 469 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 KIAA1456Q9P272 454 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 ELOA3CA0A087WX78 387 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-215ENST00000566843 DHRS3O75911 302 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 F10P00742 488 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 TAGLN2P37802 199 aaKnown RBP13.67□□□□□ -0.22
COMMD4-215ENST00000566843 EWSR1Q01844 656 aaKnown RBP eCLIP13.67□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF674Q2M3X9 581 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 ABCA11PQ4W5N1 156 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 SPNS3Q6ZMD2 512 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 OR13D1Q8NGV5 346 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 RNF138Q8WVD3 245 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 GTF3AQ92664 365 aaKnown RBP13.67□□□□□ -0.22
COMMD4-215ENST00000566843 C14orf144Q96I85 54 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 BOD1Q96IK1 185 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 NELFAQ9H3P2 528 aa13.67□□□□□ -0.22
COMMD4-215ENST00000566843 SHISA8B8ZZ34 492 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 GPR37O15354 613 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H2BKO60814 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H2BJP06899 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HEXBP07686 556 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H2BOP23527 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H2BBP33778 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H2BDP58876 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 RND3P61587 244 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H2BCP62807 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST2H2BEQ16778 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-215ENST00000566843 OGFOD3Q6PK18 319 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H2BHQ93079 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H2BNQ99877 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H2BMQ99879 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 PRDM6Q9NQX0 595 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 SDHAF3Q9NRP4 125 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 GFOD1Q9NXC2 390 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 ARID1AO14497 2285 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 PCDH15Q96QU1 1955 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 TRIOO75962 3097 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 A0A1B0GV50 99 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 DRD1P21728 446 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 GABRR1P24046 479 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 SFTPDP35247 375 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 UBE2KP61086 200 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF124Q15973 351 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HAGHQ16775 308 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 C16orf47Q6ZP98 133 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-215ENST00000566843 LANCL3Q6ZV70 420 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 DTX1Q86Y01 620 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 PRSS58Q8IYP2 241 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 OR10D4PQ8NGN7 298 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 POC1BQ8TC44 478 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 TOMM40LQ969M1 308 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 C10orf35Q96D05 121 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 KLHDC7BQ96G42 594 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 MRGPRX4Q96LA9 322 aa13.66□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF724A8MTY0 619 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 PITX3O75364 302 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 LY86O95711 162 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 QDPRP09417 244 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 ATP6V0CP27449 155 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 RBP2P50120 134 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 UCP3P55916 312 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF266Q14584 549 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 TMEM176BQ3YBM2 270 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF506Q5JVG8 444 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF343Q6P1L6 599 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 C17orf82Q86X59 251 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-215ENST00000566843 FBXL14Q8N1E6 418 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 PLPP5Q8NEB5 264 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 CCDC54Q8NEL0 328 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 OR2G3Q8NGZ4 309 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 SYT3Q9BQG1 590 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 PIGQQ9BRB3 760 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 AK3Q9UIJ7 227 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 HS3ST3B1Q9Y662 390 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 VCANP13611 3396 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF850A8MQ14 1090 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 HSPB1P04792 205 aaKnown RBP13.65□□□□□ -0.22
COMMD4-215ENST00000566843 FAHP16930 419 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 GLIPR1P48060 266 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 ERVFRD-1P60508 538 aa13.65□□□□□ -0.22
COMMD4-215ENST00000566843 LSM6P62312 80 aaKnown RBP13.65□□□□□ -0.22
COMMD4-215ENST00000566843 DLK1P80370 383 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms