RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 LOC105371242A0A075B767 164 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 A0A1B0GW55 424 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 RFPL4AA6NLU0 287 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 RFPL4AL1F8VTS6 287 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 NDUFB3O43676 98 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 ENSAO43768 121 aaKnown RBP17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 SC5DO75845 299 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 DUX4L2P0CJ85 424 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 DUX4L3P0CJ86 424 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 DUX4L4P0CJ87 422 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 DUX4L5P0CJ88 424 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 DUX4L6P0CJ89 424 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 DUX4L7P0CJ90 424 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 HOXB4P17483 251 aaPredicted RBP17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 PSMA1P25786 263 aaKnown RBP17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 BDKRB2P30411 391 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 MAP2K4P45985 399 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 CAV3P56539 151 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 LIPKQ5VXJ0 399 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 DUX4L9Q6RFH8 374 aaPredicted RBP17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 BTNL3Q6UXE8 466 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 ZNF561Q8N587 486 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 RFT1Q96AA3 541 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 DUX4Q9UBX2 424 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 LRRC42Q9Y546 428 aa17.48■□□□□ 0.39
SHCBP1-205ENST00000566016 KIR2DS1A0A191URI9 304 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 C22orf46C9J442 243 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 F8VVB4 439 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 F8VWA3 439 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 SPRY1O43609 319 aaPredicted RBP17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 KDM4BO94953 1096 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 FAM157CP0CG43 387 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 HSMCR30P0CW71 290 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 EMX1Q04741 257 aaPredicted RBP17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 TRAM1Q15629 374 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 KCTD21Q4G0X4 260 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 FIP1L1Q6UN15 594 aaKnown RBP17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 PXT1Q8NFP0 134 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 OR52N4Q8NGI2 321 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 OR5D18Q8NGL1 313 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 C7orf69Q9H7B7 122 aa17.47■□□□□ 0.39
SHCBP1-205ENST00000566016 TRAV8-7A0A075B6U6 113 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 IGKV1-12A0A0C4DH73 117 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 IGKV1D-12P01611 117 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 LIPFP07098 398 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 PPIAL4GP0DN37 164 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 PRDX2P32119 198 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 GABRA2P47869 451 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 PAX8Q06710 450 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 DGUOKQ16854 277 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 ACSM3Q53FZ2 586 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 SPIN3Q5JUX0 258 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 DDI2Q5TDH0 399 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 UNQ9370/PRO34162Q6UXP9 181 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 RNF144BQ7Z419 303 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 PHC2Q8IXK0 858 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 CD177Q8N6Q3 437 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 FCGR1BQ92637 280 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 EMG1Q92979 244 aaKnown RBP17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 NUDT16L1Q9BRJ7 211 aaKnown RBP17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 TMED9Q9BVK6 235 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 RBFOX1Q9NWB1 397 aaKnown RBP17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 SLC25A10Q9UBX3 287 aaPredicted RBP17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 MAB21L2Q9Y586 359 aa17.46■□□□□ 0.39
SHCBP1-205ENST00000566016 PIN1P1O15428 100 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 ANGPTL7O43827 346 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 SELLP14151 372 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 SRD5A1P18405 259 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 BCL3P20749 454 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 TGFBR2P37173 567 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 NPBWR2P48146 333 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 IKZF1Q13422 519 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 ZNF146Q15072 292 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 ZNF773Q6PK81 442 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 C1orf229Q6ZS94 237 aaPredicted RBP17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 BTN2A1Q7KYR7 527 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 CDH26Q8IXH8 852 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 SPARTQ8N0X7 666 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 FAM58AQ8N1B3 248 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 PNLDC1Q8NA58 520 aaKnown RBP17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 ST8SIA4Q92187 359 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 ORAI1Q96D31 301 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 MRI1Q9BV20 369 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 NOX4Q9NPH5 578 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 OPN4Q9UHM6 478 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 RPUSD1Q9UJJ7 312 aaKnown RBP17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 ATRQ13535 2644 aa17.45■□□□□ 0.38
SHCBP1-205ENST00000566016 GABRPO00591 440 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 AVPP01185 164 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 TMEM225BP0DP42 221 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 GABRA5P31644 462 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 ZNF93P35789 620 aaPredicted RBP17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 BMXP51813 675 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 UBE2UQ5VVX9 321 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 BATF2Q8N1L9 274 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 NKAIN3Q8N8D7 197 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 ZNRF1Q8ND25 227 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 C8orf46Q8TAG6 207 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 PHYHIPQ92561 330 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 GPER1Q99527 375 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms