RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CD2P06729 351 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 SFTPBP07988 381 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 PDZK1IP1Q13113 114 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 C6orf141Q5SZD1 244 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 RNLSQ5VYX0 342 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 DMKNQ6E0U4 476 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-212ENST00000565517 ZNF529Q6P280 563 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 AHSA2Q719I0 299 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 PHC2Q8IXK0 858 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 CMTM4Q8IZR5 234 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 TMEM185AQ8NFB2 350 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 OR13C9Q8NGT0 318 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 H1FXQ92522 213 aaKnown RBP12.72□□□□□ -0.37
COMMD4-212ENST00000565517 RGP1Q92546 391 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-212ENST00000565517 SLAMF9Q96A28 289 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 FAM234AQ9H0X4 552 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 RHOFQ9HBH0 211 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 ZNF281Q9Y2X9 895 aa12.72□□□□□ -0.37
COMMD4-212ENST00000565517 SIRT4Q9Y6E7 314 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-212ENST00000565517 CENPVL3A0A0U1RRI6 287 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 F8VVB4 439 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 F8VWA3 439 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 CHRM2P08172 466 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 MYF6P23409 242 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 C21orf33P30042 268 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-212ENST00000565517 POU3F4P49335 361 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 TAS2R43P59537 309 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 SRSF2Q01130 221 aaKnown RBP12.71□□□□□ -0.37
COMMD4-212ENST00000565517 METAP1DQ6UB28 335 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-212ENST00000565517 RBMS3Q6XE24 437 aaKnown RBP12.71□□□□□ -0.37
COMMD4-212ENST00000565517 BCL6BQ8N143 479 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-212ENST00000565517 TBC1D15Q8TC07 691 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 ANKRD60Q9BZ19 345 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 OR14J1Q9UGF5 321 aa12.71□□□□□ -0.37
COMMD4-212ENST00000565517 IGHV3OR16-10A0A075B7F0 116 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 TRIM77I1YAP6 450 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 K7N7A8 449 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 M0R1W7 72 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 TK1P04183 234 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 CD1AP06126 327 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 CDK1P06493 297 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 RAB3AP20336 220 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 NPBWR2P48146 333 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 HSPA13P48723 471 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 CAPZA1P52907 286 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 WNT4P56705 351 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 ZNF146Q15072 292 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 KISS1Q15726 138 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 CRIP3Q6Q6R5 217 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 FIP1L1Q6UN15 594 aaKnown RBP12.7□□□□□ -0.38
COMMD4-212ENST00000565517 FAM58AQ8N1B3 248 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 BATF2Q8N1L9 274 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 NANOGP1Q8N7R0 232 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 SIGLECL1Q8N7X8 197 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 ZSCAN4Q8NAM6 433 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-212ENST00000565517 GHSRQ92847 366 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 EMG1Q92979 244 aaKnown RBP12.7□□□□□ -0.38
COMMD4-212ENST00000565517 MYDGFQ969H8 173 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 CPNE2Q96FN4 548 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-212ENST00000565517 C19orf24Q9BVV8 132 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 PRDM13Q9H4Q3 707 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 UNKLQ9H9P5 680 aaKnown RBP12.7□□□□□ -0.38
COMMD4-212ENST00000565517 SCN3BQ9NY72 215 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 ONECUT1Q9UBC0 465 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 ERGIC3Q9Y282 383 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 PCDHGB5Q9Y5G0 923 aa12.7□□□□□ -0.38
COMMD4-212ENST00000565517 A0A1W2PQ09 198 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 MYL12BO14950 172 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 MAGEB3O15480 346 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 SPRY1O43609 319 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-212ENST00000565517 RGS9O75916 674 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-212ENST00000565517 KDM4BO94953 1096 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 ALDOBP05062 364 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 HCKP08631 526 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 BCL3P20749 454 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 SOX2P48431 317 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 CEBPDP49716 269 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-212ENST00000565517 COL10A1Q03692 680 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 BLMHQ13867 455 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 YIF1BQ5BJH7 314 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 SPIN3Q5JUX0 258 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 VMO1Q7Z5L0 202 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 Q8N7P7 452 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 ZDHHC22Q8N966 263 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 OR5D13Q8NGL4 314 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 FAM216AQ8WUB2 273 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 TMEM106AQ96A25 262 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 SNX22Q96L94 193 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 PGLYRP3Q96LB9 341 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 ZNF48Q96MX3 618 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-212ENST00000565517 SPACA5Q96QH8 159 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 CDCA4Q9BXL8 241 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 HMG20AQ9NP66 347 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 GLS2Q9UI32 602 aa12.69□□□□□ -0.38
COMMD4-212ENST00000565517 IGHV1-69DA0A0B4J2H0 117 aa12.68□□□□□ -0.38
COMMD4-212ENST00000565517 IGKV1-12A0A0C4DH73 117 aa12.68□□□□□ -0.38
COMMD4-212ENST00000565517 TRBV5-5A0A0J9YX44 114 aa12.68□□□□□ -0.38
COMMD4-212ENST00000565517 A0A1W2PPH5 198 aa12.68□□□□□ -0.38
COMMD4-212ENST00000565517 PTGES3LE9PB15 166 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms