RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 IL13RA2Q14627 380 aa13.29□□□□□ -0.28
COMMD4-210ENST00000564587 TAF9Q16594 264 aa13.29□□□□□ -0.28
COMMD4-210ENST00000564587 TMEM255AQ5JRV8 349 aa13.29□□□□□ -0.28
COMMD4-210ENST00000564587 HAGHLQ6PII5 290 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-210ENST00000564587 GLCCI1Q86VQ1 547 aa13.29□□□□□ -0.28
COMMD4-210ENST00000564587 BBC3Q96PG8 261 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-210ENST00000564587 FGF23Q9GZV9 251 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-210ENST00000564587 CXXC4Q9H2H0 198 aa13.29□□□□□ -0.28
COMMD4-210ENST00000564587 NPDC1Q9NQX5 325 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-210ENST00000564587 SLC2A8Q9NY64 477 aa13.29□□□□□ -0.28
COMMD4-210ENST00000564587 CRIM1Q9NZV1 1036 aa13.29□□□□□ -0.28
COMMD4-210ENST00000564587 ALG5Q9Y673 324 aa13.29□□□□□ -0.28
COMMD4-210ENST00000564587 HEATR1Q9H583 2144 aaKnown RBP13.28□□□□□ -0.28
COMMD4-210ENST00000564587 TRAV6A0A075B6T7 132 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 A0A1B0GWJ7 208 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 LILRA1O75019 489 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 IFNA6P05013 189 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 GLAP06280 429 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 ZNF250P15622 560 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 DTYMKP23919 212 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 MECP2P51608 486 aaKnown RBP13.28□□□□□ -0.28
COMMD4-210ENST00000564587 TAS2R46P59540 309 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 HOGA1Q86XE5 327 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 SLAMF9Q96A28 289 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 MED30Q96HR3 178 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 COQ3Q9NZJ6 369 aa13.28□□□□□ -0.28
COMMD4-210ENST00000564587 ELF5Q9UKW6 265 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-210ENST00000564587 GEMIN2O14893 280 aaKnown RBP13.27□□□□□ -0.29
COMMD4-210ENST00000564587 IGHV3-13P01766 116 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 AMY2AP04746 511 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 IL5P05113 134 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 BCL3P20749 454 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 CD40P25942 277 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 CHRNB4P30926 498 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 FABP6P51161 128 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 NKX6-1P78426 367 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-210ENST00000564587 C11orf91Q3C1V1 193 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 FBXL19-AS1Q494R0 122 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 NKAPLQ5M9Q1 402 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 VAX1Q5SQQ9 334 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 METTL11BQ5VVY1 283 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 FIP1L1Q6UN15 594 aaKnown RBP13.27□□□□□ -0.29
COMMD4-210ENST00000564587 TMEM17Q86X19 198 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 BPIFB2Q8N4F0 458 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 ARRDC1Q8N5I2 433 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 NUP37Q8NFH4 326 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 OR51S1Q8NGJ8 323 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 OR4K15Q8NH41 348 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 HPS1Q92902 700 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 EMG1Q92979 244 aaKnown RBP13.27□□□□□ -0.29
COMMD4-210ENST00000564587 GINS4Q9BRT9 223 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 GPN1Q9HCN4 374 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-210ENST00000564587 MTCH1Q9NZJ7 389 aa13.27□□□□□ -0.29
COMMD4-210ENST00000564587 A0A0B4J293 547 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 A0A1B0GUH1 482 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 POM121CA8CG34 1229 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 VSTM5A8MXK1 200 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 CCL21O00585 134 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 CCNKO75909 580 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 AMY2BP19961 511 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 CCKARP32238 428 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 NPBWR2P48146 333 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 KLF3P57682 345 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-210ENST00000564587 PIGYQ3MUY2 71 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 SIGIRRQ6IA17 410 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 C6orf201Q7Z4U5 140 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 FAM58AQ8N1B3 248 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 OR10AD1Q8NGE0 317 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 CCDC107Q8WV48 283 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 DVL3Q92997 716 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-210ENST00000564587 FBXW5Q969U6 566 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 CMSS1Q9BQ75 279 aaKnown RBP13.26□□□□□ -0.29
COMMD4-210ENST00000564587 ALX4Q9H161 411 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-210ENST00000564587 IFT22Q9H7X7 185 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 OSGIN2Q9Y236 505 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 IGSF10Q6WRI0 2623 aa13.26□□□□□ -0.29
COMMD4-210ENST00000564587 HELZ2Q9BYK8 2649 aaKnown RBP13.25□□□□□ -0.29
COMMD4-210ENST00000564587 ARPC1BO15143 372 aaKnown RBP13.25□□□□□ -0.29
COMMD4-210ENST00000564587 SYNGR1O43759 233 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 NOS1APO75052 506 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-210ENST00000564587 OR7C1O76099 320 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-210ENST00000564587 ZNF735P0CB33 412 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 OR3A3P47888 321 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 RRAS2P62070 204 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-210ENST00000564587 ALKBH6Q3KRA9 238 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 ALKBH2Q6NS38 261 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 FAAP20Q6NZ36 180 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 IDO2Q6ZQW0 420 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 GVQW1Q8N7I0 195 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 SCCPDHQ8NBX0 429 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 BEST4Q8NFU0 473 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 OR5H2Q8NGV7 314 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 GTF3AQ92664 365 aaKnown RBP13.25□□□□□ -0.29
COMMD4-210ENST00000564587 SCGB3A2Q96PL1 93 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 TINAGL1Q9GZM7 467 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-210ENST00000564587 TLNRD1Q9H1K6 362 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 MED28Q9H204 178 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 GHITMQ9H3K2 345 aa13.25□□□□□ -0.29
COMMD4-210ENST00000564587 RIMS4Q9H426 269 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-210ENST00000564587 MYOZ1Q9NP98 299 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms